Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4rl1Q8K0S5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4rl1Q8K0S5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4rl1Q8K0S5 Rab3c-203ENSMUST00000224180 967 ntBASIC19.67■□□□□ 0.74
Rtn4rl1Q8K0S5 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.67■□□□□ 0.74
Rtn4rl1Q8K0S5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4rl1Q8K0S5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rtn4rl1Q8K0S5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4rl1Q8K0S5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rtn4rl1Q8K0S5 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.67■□□□□ 0.74
Rtn4rl1Q8K0S5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.67■□□□□ 0.74
Rtn4rl1Q8K0S5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Rtn4rl1Q8K0S5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4rl1Q8K0S5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.66■□□□□ 0.74
Rtn4rl1Q8K0S5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.66■□□□□ 0.74
Rtn4rl1Q8K0S5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4rl1Q8K0S5 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Rtn4rl1Q8K0S5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
Rtn4rl1Q8K0S5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.66■□□□□ 0.74
Rtn4rl1Q8K0S5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4rl1Q8K0S5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
Rtn4rl1Q8K0S5 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Rtn4rl1Q8K0S5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4rl1Q8K0S5 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4rl1Q8K0S5 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rtn4rl1Q8K0S5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4rl1Q8K0S5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4rl1Q8K0S5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rtn4rl1Q8K0S5 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtn4rl1Q8K0S5 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.65■□□□□ 0.74
Rtn4rl1Q8K0S5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rtn4rl1Q8K0S5 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rtn4rl1Q8K0S5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rtn4rl1Q8K0S5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Rtn4rl1Q8K0S5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rtn4rl1Q8K0S5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Rtn4rl1Q8K0S5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rtn4rl1Q8K0S5 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtn4rl1Q8K0S5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.64■□□□□ 0.73
Rtn4rl1Q8K0S5 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.64■□□□□ 0.73
Rtn4rl1Q8K0S5 Gm10812-201ENSMUST00000099864 546 ntBASIC19.64■□□□□ 0.73
Rtn4rl1Q8K0S5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rtn4rl1Q8K0S5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rtn4rl1Q8K0S5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.64■□□□□ 0.73
Rtn4rl1Q8K0S5 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtn4rl1Q8K0S5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rtn4rl1Q8K0S5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtn4rl1Q8K0S5 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.63■□□□□ 0.73
Rtn4rl1Q8K0S5 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtn4rl1Q8K0S5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtn4rl1Q8K0S5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtn4rl1Q8K0S5 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rtn4rl1Q8K0S5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtn4rl1Q8K0S5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtn4rl1Q8K0S5 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rtn4rl1Q8K0S5 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rtn4rl1Q8K0S5 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.63■□□□□ 0.73
Rtn4rl1Q8K0S5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rtn4rl1Q8K0S5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn4rl1Q8K0S5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.62■□□□□ 0.73
Rtn4rl1Q8K0S5 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rtn4rl1Q8K0S5 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn4rl1Q8K0S5 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn4rl1Q8K0S5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rtn4rl1Q8K0S5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4rl1Q8K0S5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4rl1Q8K0S5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4rl1Q8K0S5 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4rl1Q8K0S5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4rl1Q8K0S5 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.61■□□□□ 0.73
Rtn4rl1Q8K0S5 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4rl1Q8K0S5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4rl1Q8K0S5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rtn4rl1Q8K0S5 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rtn4rl1Q8K0S5 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rtn4rl1Q8K0S5 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Rtn4rl1Q8K0S5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.6■□□□□ 0.73
Rtn4rl1Q8K0S5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC19.6■□□□□ 0.73
Rtn4rl1Q8K0S5 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn4rl1Q8K0S5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rtn4rl1Q8K0S5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
Rtn4rl1Q8K0S5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Rtn4rl1Q8K0S5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4rl1Q8K0S5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
Rtn4rl1Q8K0S5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.59■□□□□ 0.73
Rtn4rl1Q8K0S5 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4rl1Q8K0S5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4rl1Q8K0S5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4rl1Q8K0S5 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rtn4rl1Q8K0S5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.58■□□□□ 0.73
Rtn4rl1Q8K0S5 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.58■□□□□ 0.73
Rtn4rl1Q8K0S5 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.58■□□□□ 0.73
Rtn4rl1Q8K0S5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rtn4rl1Q8K0S5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rtn4rl1Q8K0S5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rtn4rl1Q8K0S5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Rtn4rl1Q8K0S5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.58■□□□□ 0.72
Rtn4rl1Q8K0S5 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Rtn4rl1Q8K0S5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Rtn4rl1Q8K0S5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms