Protein–RNA interactions for Protein: Q8CIG3

Kdm1b, Lysine-specific histone demethylase 1B, mousemouse

Predictions only

Length 826 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1bQ8CIG3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm1bQ8CIG3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.06■□□□□ 0.8
Kdm1bQ8CIG3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm1bQ8CIG3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Kdm1bQ8CIG3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm1bQ8CIG3 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Kdm1bQ8CIG3 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.06■□□□□ 0.8
Kdm1bQ8CIG3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1bQ8CIG3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1bQ8CIG3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.05■□□□□ 0.8
Kdm1bQ8CIG3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1bQ8CIG3 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1bQ8CIG3 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.05■□□□□ 0.8
Kdm1bQ8CIG3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Kdm1bQ8CIG3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Kdm1bQ8CIG3 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Kdm1bQ8CIG3 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kdm1bQ8CIG3 Gm43173-201ENSMUST00000202246 593 ntBASIC20.04■□□□□ 0.8
Kdm1bQ8CIG3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kdm1bQ8CIG3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Kdm1bQ8CIG3 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kdm1bQ8CIG3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Kdm1bQ8CIG3 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Kdm1bQ8CIG3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Kdm1bQ8CIG3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm1bQ8CIG3 Gm12821-201ENSMUST00000120022 600 ntBASIC20.03■□□□□ 0.8
Kdm1bQ8CIG3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm1bQ8CIG3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm1bQ8CIG3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.03■□□□□ 0.8
Kdm1bQ8CIG3 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.03■□□□□ 0.8
Kdm1bQ8CIG3 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm1bQ8CIG3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Kdm1bQ8CIG3 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm1bQ8CIG3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Kdm1bQ8CIG3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Kdm1bQ8CIG3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Kdm1bQ8CIG3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Kdm1bQ8CIG3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Kdm1bQ8CIG3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Kdm1bQ8CIG3 Smad6-203ENSMUST00000179458 273 ntBASIC20.02■□□□□ 0.8
Kdm1bQ8CIG3 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.02■□□□□ 0.8
Kdm1bQ8CIG3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Kdm1bQ8CIG3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Kdm1bQ8CIG3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Kdm1bQ8CIG3 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Kdm1bQ8CIG3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kdm1bQ8CIG3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Kdm1bQ8CIG3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Kdm1bQ8CIG3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kdm1bQ8CIG3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.01■□□□□ 0.79
Kdm1bQ8CIG3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kdm1bQ8CIG3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Kdm1bQ8CIG3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Kdm1bQ8CIG3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kdm1bQ8CIG3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Kdm1bQ8CIG3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Kdm1bQ8CIG3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kdm1bQ8CIG3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Kdm1bQ8CIG3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kdm1bQ8CIG3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kdm1bQ8CIG3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20■□□□□ 0.79
Kdm1bQ8CIG3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20■□□□□ 0.79
Kdm1bQ8CIG3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Kdm1bQ8CIG3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Kdm1bQ8CIG3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20■□□□□ 0.79
Kdm1bQ8CIG3 Gm8493-201ENSMUST00000196881 489 ntBASIC20■□□□□ 0.79
Kdm1bQ8CIG3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20■□□□□ 0.79
Kdm1bQ8CIG3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kdm1bQ8CIG3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kdm1bQ8CIG3 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20■□□□□ 0.79
Kdm1bQ8CIG3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20■□□□□ 0.79
Kdm1bQ8CIG3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Kdm1bQ8CIG3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Kdm1bQ8CIG3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Kdm1bQ8CIG3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kdm1bQ8CIG3 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kdm1bQ8CIG3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Kdm1bQ8CIG3 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.99■□□□□ 0.79
Kdm1bQ8CIG3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kdm1bQ8CIG3 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kdm1bQ8CIG3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kdm1bQ8CIG3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Kdm1bQ8CIG3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.99■□□□□ 0.79
Kdm1bQ8CIG3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kdm1bQ8CIG3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.99■□□□□ 0.79
Kdm1bQ8CIG3 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kdm1bQ8CIG3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
Kdm1bQ8CIG3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kdm1bQ8CIG3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Kdm1bQ8CIG3 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Kdm1bQ8CIG3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Kdm1bQ8CIG3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Kdm1bQ8CIG3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Kdm1bQ8CIG3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Kdm1bQ8CIG3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Kdm1bQ8CIG3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Kdm1bQ8CIG3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
Kdm1bQ8CIG3 Gm6139-201ENSMUST00000079261 882 ntBASIC19.98■□□□□ 0.79
Kdm1bQ8CIG3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Kdm1bQ8CIG3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms