Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps50Q8CI71 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps50Q8CI71 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Vps50Q8CI71 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps50Q8CI71 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps50Q8CI71 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Vps50Q8CI71 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps50Q8CI71 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Vps50Q8CI71 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Vps50Q8CI71 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Vps50Q8CI71 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps50Q8CI71 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Vps50Q8CI71 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Vps50Q8CI71 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps50Q8CI71 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps50Q8CI71 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Vps50Q8CI71 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps50Q8CI71 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps50Q8CI71 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps50Q8CI71 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.82■□□□□ 0.6
Vps50Q8CI71 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps50Q8CI71 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Vps50Q8CI71 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps50Q8CI71 Gm8493-201ENSMUST00000196881 489 ntBASIC18.82■□□□□ 0.6
Vps50Q8CI71 Gm6139-201ENSMUST00000079261 882 ntBASIC18.82■□□□□ 0.6
Vps50Q8CI71 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.82■□□□□ 0.6
Vps50Q8CI71 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Vps50Q8CI71 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps50Q8CI71 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Vps50Q8CI71 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Vps50Q8CI71 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps50Q8CI71 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Vps50Q8CI71 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps50Q8CI71 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps50Q8CI71 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Vps50Q8CI71 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps50Q8CI71 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.81■□□□□ 0.6
Vps50Q8CI71 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps50Q8CI71 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Vps50Q8CI71 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps50Q8CI71 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Vps50Q8CI71 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps50Q8CI71 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps50Q8CI71 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps50Q8CI71 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Vps50Q8CI71 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps50Q8CI71 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Vps50Q8CI71 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.8■□□□□ 0.6
Vps50Q8CI71 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Vps50Q8CI71 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Vps50Q8CI71 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Vps50Q8CI71 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps50Q8CI71 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps50Q8CI71 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps50Q8CI71 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps50Q8CI71 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps50Q8CI71 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps50Q8CI71 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Vps50Q8CI71 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.79■□□□□ 0.6
Vps50Q8CI71 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Vps50Q8CI71 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Vps50Q8CI71 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.78■□□□□ 0.6
Vps50Q8CI71 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps50Q8CI71 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps50Q8CI71 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps50Q8CI71 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Vps50Q8CI71 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps50Q8CI71 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps50Q8CI71 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps50Q8CI71 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Vps50Q8CI71 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Vps50Q8CI71 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Vps50Q8CI71 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps50Q8CI71 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps50Q8CI71 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps50Q8CI71 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Vps50Q8CI71 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps50Q8CI71 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps50Q8CI71 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Vps50Q8CI71 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
Vps50Q8CI71 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.77■□□□□ 0.6
Vps50Q8CI71 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Vps50Q8CI71 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
Vps50Q8CI71 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Vps50Q8CI71 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vps50Q8CI71 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Vps50Q8CI71 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps50Q8CI71 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps50Q8CI71 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.76■□□□□ 0.59
Vps50Q8CI71 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps50Q8CI71 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.76■□□□□ 0.59
Vps50Q8CI71 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Vps50Q8CI71 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
Vps50Q8CI71 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.76■□□□□ 0.59
Vps50Q8CI71 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps50Q8CI71 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
Vps50Q8CI71 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.76■□□□□ 0.59
Vps50Q8CI71 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Vps50Q8CI71 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Vps50Q8CI71 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms