Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fam228aQ8CDW1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Fam228aQ8CDW1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.23■□□□□ 0.83
Fam228aQ8CDW1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Fam228aQ8CDW1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fam228aQ8CDW1 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fam228aQ8CDW1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.23■□□□□ 0.83
Fam228aQ8CDW1 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fam228aQ8CDW1 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Fam228aQ8CDW1 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fam228aQ8CDW1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.22■□□□□ 0.83
Fam228aQ8CDW1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam228aQ8CDW1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam228aQ8CDW1 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam228aQ8CDW1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam228aQ8CDW1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam228aQ8CDW1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.22■□□□□ 0.83
Fam228aQ8CDW1 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Fam228aQ8CDW1 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam228aQ8CDW1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Fam228aQ8CDW1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam228aQ8CDW1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Fam228aQ8CDW1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Fam228aQ8CDW1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam228aQ8CDW1 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.21■□□□□ 0.83
Fam228aQ8CDW1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.21■□□□□ 0.83
Fam228aQ8CDW1 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.21■□□□□ 0.83
Fam228aQ8CDW1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam228aQ8CDW1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam228aQ8CDW1 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Fam228aQ8CDW1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Fam228aQ8CDW1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam228aQ8CDW1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam228aQ8CDW1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam228aQ8CDW1 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.21■□□□□ 0.83
Fam228aQ8CDW1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Fam228aQ8CDW1 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Fam228aQ8CDW1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Fam228aQ8CDW1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Fam228aQ8CDW1 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Fam228aQ8CDW1 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Fam228aQ8CDW1 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Fam228aQ8CDW1 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.2■□□□□ 0.82
Fam228aQ8CDW1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Fam228aQ8CDW1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Fam228aQ8CDW1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
Fam228aQ8CDW1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Fam228aQ8CDW1 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.19■□□□□ 0.82
Fam228aQ8CDW1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fam228aQ8CDW1 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Fam228aQ8CDW1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fam228aQ8CDW1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.19■□□□□ 0.82
Fam228aQ8CDW1 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fam228aQ8CDW1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fam228aQ8CDW1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Fam228aQ8CDW1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Fam228aQ8CDW1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Fam228aQ8CDW1 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam228aQ8CDW1 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam228aQ8CDW1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam228aQ8CDW1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam228aQ8CDW1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam228aQ8CDW1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam228aQ8CDW1 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Fam228aQ8CDW1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Fam228aQ8CDW1 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.18■□□□□ 0.82
Fam228aQ8CDW1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Fam228aQ8CDW1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Fam228aQ8CDW1 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.18■□□□□ 0.82
Fam228aQ8CDW1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam228aQ8CDW1 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam228aQ8CDW1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam228aQ8CDW1 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam228aQ8CDW1 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam228aQ8CDW1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Fam228aQ8CDW1 Gm7417-201ENSMUST00000192950 473 ntBASIC20.17■□□□□ 0.82
Fam228aQ8CDW1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam228aQ8CDW1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam228aQ8CDW1 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Fam228aQ8CDW1 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam228aQ8CDW1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Fam228aQ8CDW1 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam228aQ8CDW1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Fam228aQ8CDW1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam228aQ8CDW1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam228aQ8CDW1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Fam228aQ8CDW1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Fam228aQ8CDW1 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam228aQ8CDW1 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam228aQ8CDW1 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam228aQ8CDW1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam228aQ8CDW1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.15■□□□□ 0.82
Fam228aQ8CDW1 BC021767-201ENSMUST00000126387 1716 ntBASIC20.15■□□□□ 0.82
Fam228aQ8CDW1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam228aQ8CDW1 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Fam228aQ8CDW1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Fam228aQ8CDW1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Fam228aQ8CDW1 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.14■□□□□ 0.82
Fam228aQ8CDW1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Fam228aQ8CDW1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms