Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SynpoQ8CC35 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SynpoQ8CC35 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.58■□□□□ 0.56
SynpoQ8CC35 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.58■□□□□ 0.56
SynpoQ8CC35 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.56
SynpoQ8CC35 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
SynpoQ8CC35 Gm40848-201ENSMUST00000221998 324 ntBASIC18.58■□□□□ 0.56
SynpoQ8CC35 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SynpoQ8CC35 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SynpoQ8CC35 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
SynpoQ8CC35 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SynpoQ8CC35 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.58■□□□□ 0.56
SynpoQ8CC35 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SynpoQ8CC35 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
SynpoQ8CC35 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.57■□□□□ 0.56
SynpoQ8CC35 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SynpoQ8CC35 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SynpoQ8CC35 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SynpoQ8CC35 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SynpoQ8CC35 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SynpoQ8CC35 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.57■□□□□ 0.56
SynpoQ8CC35 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SynpoQ8CC35 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.56■□□□□ 0.56
SynpoQ8CC35 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SynpoQ8CC35 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SynpoQ8CC35 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SynpoQ8CC35 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.56■□□□□ 0.56
SynpoQ8CC35 Smad6-203ENSMUST00000179458 273 ntBASIC18.56■□□□□ 0.56
SynpoQ8CC35 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.56■□□□□ 0.56
SynpoQ8CC35 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.56■□□□□ 0.56
SynpoQ8CC35 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SynpoQ8CC35 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SynpoQ8CC35 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.56■□□□□ 0.56
SynpoQ8CC35 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SynpoQ8CC35 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SynpoQ8CC35 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SynpoQ8CC35 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SynpoQ8CC35 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SynpoQ8CC35 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SynpoQ8CC35 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SynpoQ8CC35 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SynpoQ8CC35 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SynpoQ8CC35 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SynpoQ8CC35 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.55■□□□□ 0.56
SynpoQ8CC35 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SynpoQ8CC35 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SynpoQ8CC35 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SynpoQ8CC35 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SynpoQ8CC35 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
SynpoQ8CC35 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SynpoQ8CC35 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SynpoQ8CC35 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SynpoQ8CC35 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SynpoQ8CC35 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SynpoQ8CC35 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SynpoQ8CC35 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SynpoQ8CC35 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.54■□□□□ 0.56
SynpoQ8CC35 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SynpoQ8CC35 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SynpoQ8CC35 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.54■□□□□ 0.56
SynpoQ8CC35 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SynpoQ8CC35 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SynpoQ8CC35 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SynpoQ8CC35 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SynpoQ8CC35 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SynpoQ8CC35 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SynpoQ8CC35 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SynpoQ8CC35 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.54■□□□□ 0.56
SynpoQ8CC35 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SynpoQ8CC35 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SynpoQ8CC35 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.53■□□□□ 0.56
SynpoQ8CC35 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.53■□□□□ 0.56
SynpoQ8CC35 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SynpoQ8CC35 Gm10493-201ENSMUST00000097270 612 ntBASIC18.53■□□□□ 0.56
SynpoQ8CC35 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SynpoQ8CC35 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SynpoQ8CC35 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SynpoQ8CC35 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SynpoQ8CC35 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SynpoQ8CC35 Mir6236-201ENSMUST00000184437 123 ntBASIC18.52■□□□□ 0.56
SynpoQ8CC35 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SynpoQ8CC35 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SynpoQ8CC35 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
SynpoQ8CC35 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SynpoQ8CC35 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SynpoQ8CC35 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SynpoQ8CC35 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SynpoQ8CC35 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SynpoQ8CC35 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SynpoQ8CC35 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.51■□□□□ 0.55
SynpoQ8CC35 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.51■□□□□ 0.55
SynpoQ8CC35 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SynpoQ8CC35 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.51■□□□□ 0.55
SynpoQ8CC35 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SynpoQ8CC35 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SynpoQ8CC35 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SynpoQ8CC35 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SynpoQ8CC35 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SynpoQ8CC35 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SynpoQ8CC35 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms