Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap54Q8C6S9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap54Q8C6S9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.74■□□□□ 0.59
Cfap54Q8C6S9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap54Q8C6S9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Cfap54Q8C6S9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.74■□□□□ 0.59
Cfap54Q8C6S9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap54Q8C6S9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap54Q8C6S9 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap54Q8C6S9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap54Q8C6S9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.74■□□□□ 0.59
Cfap54Q8C6S9 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cfap54Q8C6S9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Cfap54Q8C6S9 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.74■□□□□ 0.59
Cfap54Q8C6S9 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap54Q8C6S9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cfap54Q8C6S9 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap54Q8C6S9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap54Q8C6S9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cfap54Q8C6S9 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap54Q8C6S9 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cfap54Q8C6S9 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
Cfap54Q8C6S9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap54Q8C6S9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap54Q8C6S9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap54Q8C6S9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap54Q8C6S9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap54Q8C6S9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cfap54Q8C6S9 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.72■□□□□ 0.59
Cfap54Q8C6S9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap54Q8C6S9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap54Q8C6S9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap54Q8C6S9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap54Q8C6S9 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.71■□□□□ 0.59
Cfap54Q8C6S9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap54Q8C6S9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Cfap54Q8C6S9 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Cfap54Q8C6S9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.7■□□□□ 0.58
Cfap54Q8C6S9 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap54Q8C6S9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap54Q8C6S9 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.7■□□□□ 0.58
Cfap54Q8C6S9 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap54Q8C6S9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Cfap54Q8C6S9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap54Q8C6S9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap54Q8C6S9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap54Q8C6S9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.7■□□□□ 0.58
Cfap54Q8C6S9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap54Q8C6S9 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap54Q8C6S9 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap54Q8C6S9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap54Q8C6S9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap54Q8C6S9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cfap54Q8C6S9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cfap54Q8C6S9 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap54Q8C6S9 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap54Q8C6S9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap54Q8C6S9 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cfap54Q8C6S9 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cfap54Q8C6S9 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cfap54Q8C6S9 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cfap54Q8C6S9 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cfap54Q8C6S9 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Cfap54Q8C6S9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.69■□□□□ 0.58
Cfap54Q8C6S9 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Cfap54Q8C6S9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap54Q8C6S9 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap54Q8C6S9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap54Q8C6S9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap54Q8C6S9 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cfap54Q8C6S9 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap54Q8C6S9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.68■□□□□ 0.58
Cfap54Q8C6S9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap54Q8C6S9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap54Q8C6S9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap54Q8C6S9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap54Q8C6S9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap54Q8C6S9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap54Q8C6S9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Cfap54Q8C6S9 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.68■□□□□ 0.58
Cfap54Q8C6S9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cfap54Q8C6S9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Cfap54Q8C6S9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap54Q8C6S9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap54Q8C6S9 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.67■□□□□ 0.58
Cfap54Q8C6S9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap54Q8C6S9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.67■□□□□ 0.58
Cfap54Q8C6S9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap54Q8C6S9 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Cfap54Q8C6S9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Cfap54Q8C6S9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cfap54Q8C6S9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.67■□□□□ 0.58
Cfap54Q8C6S9 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.67■□□□□ 0.58
Cfap54Q8C6S9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap54Q8C6S9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap54Q8C6S9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap54Q8C6S9 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cfap54Q8C6S9 Gm6576-201ENSMUST00000169678 883 ntBASIC18.67■□□□□ 0.58
Cfap54Q8C6S9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cfap54Q8C6S9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms