Protein–RNA interactions for Protein: Q8C3R1

Brat1, BRCA1-associated ATM activator 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brat1Q8C3R1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Brat1Q8C3R1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Brat1Q8C3R1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Brat1Q8C3R1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Brat1Q8C3R1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Brat1Q8C3R1 Gm42778-201ENSMUST00000199644 553 ntBASIC20.35■□□□□ 0.85
Brat1Q8C3R1 Gm42642-201ENSMUST00000200683 355 ntBASIC20.35■□□□□ 0.85
Brat1Q8C3R1 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Brat1Q8C3R1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Brat1Q8C3R1 Reep4-203ENSMUST00000226563 1444 ntBASIC20.35■□□□□ 0.85
Brat1Q8C3R1 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Brat1Q8C3R1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Brat1Q8C3R1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Brat1Q8C3R1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Brat1Q8C3R1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Brat1Q8C3R1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Brat1Q8C3R1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Brat1Q8C3R1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.34■□□□□ 0.85
Brat1Q8C3R1 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Brat1Q8C3R1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Brat1Q8C3R1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Brat1Q8C3R1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.34■□□□□ 0.85
Brat1Q8C3R1 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Brat1Q8C3R1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.33■□□□□ 0.85
Brat1Q8C3R1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Brat1Q8C3R1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Brat1Q8C3R1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Brat1Q8C3R1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Brat1Q8C3R1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Brat1Q8C3R1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Brat1Q8C3R1 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Brat1Q8C3R1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Brat1Q8C3R1 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Brat1Q8C3R1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Brat1Q8C3R1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.32■□□□□ 0.84
Brat1Q8C3R1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.32■□□□□ 0.84
Brat1Q8C3R1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Brat1Q8C3R1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Brat1Q8C3R1 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
Brat1Q8C3R1 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Brat1Q8C3R1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Brat1Q8C3R1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.31■□□□□ 0.84
Brat1Q8C3R1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Brat1Q8C3R1 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Brat1Q8C3R1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Brat1Q8C3R1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Brat1Q8C3R1 Gm13234-201ENSMUST00000120010 747 ntBASIC20.31■□□□□ 0.84
Brat1Q8C3R1 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Brat1Q8C3R1 Gm10033-202ENSMUST00000211874 928 ntBASIC20.31■□□□□ 0.84
Brat1Q8C3R1 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Brat1Q8C3R1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Brat1Q8C3R1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Brat1Q8C3R1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Brat1Q8C3R1 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Brat1Q8C3R1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Brat1Q8C3R1 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.3■□□□□ 0.84
Brat1Q8C3R1 Gm18671-201ENSMUST00000214826 683 ntBASIC20.3■□□□□ 0.84
Brat1Q8C3R1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Brat1Q8C3R1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Brat1Q8C3R1 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.3■□□□□ 0.84
Brat1Q8C3R1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Brat1Q8C3R1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Brat1Q8C3R1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Brat1Q8C3R1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Brat1Q8C3R1 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Brat1Q8C3R1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.29■□□□□ 0.84
Brat1Q8C3R1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
Brat1Q8C3R1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Brat1Q8C3R1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Brat1Q8C3R1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
Brat1Q8C3R1 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Brat1Q8C3R1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Brat1Q8C3R1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Brat1Q8C3R1 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Brat1Q8C3R1 Gm38205-201ENSMUST00000192243 258 ntBASIC20.28■□□□□ 0.84
Brat1Q8C3R1 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.28■□□□□ 0.84
Brat1Q8C3R1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Brat1Q8C3R1 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Brat1Q8C3R1 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Brat1Q8C3R1 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Brat1Q8C3R1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Brat1Q8C3R1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Brat1Q8C3R1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Brat1Q8C3R1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Brat1Q8C3R1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Brat1Q8C3R1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Brat1Q8C3R1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Brat1Q8C3R1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Brat1Q8C3R1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Brat1Q8C3R1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Brat1Q8C3R1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Brat1Q8C3R1 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.27■□□□□ 0.83
Brat1Q8C3R1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Brat1Q8C3R1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.27■□□□□ 0.83
Brat1Q8C3R1 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Brat1Q8C3R1 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Brat1Q8C3R1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Brat1Q8C3R1 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Brat1Q8C3R1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Brat1Q8C3R1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms