Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Ptcd1Q8C2E4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ptcd1Q8C2E4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC23.83■■□□□ 1.41
Ptcd1Q8C2E4 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
Ptcd1Q8C2E4 Gm7977-201ENSMUST00000193787 748 ntBASIC23.83■■□□□ 1.41
Ptcd1Q8C2E4 Gm6420-201ENSMUST00000193885 723 ntBASIC23.83■■□□□ 1.41
Ptcd1Q8C2E4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC23.83■■□□□ 1.41
Ptcd1Q8C2E4 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Ptcd1Q8C2E4 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ptcd1Q8C2E4 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.41
Ptcd1Q8C2E4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ptcd1Q8C2E4 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ptcd1Q8C2E4 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ptcd1Q8C2E4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Ptcd1Q8C2E4 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Ptcd1Q8C2E4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.4
Ptcd1Q8C2E4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ptcd1Q8C2E4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ptcd1Q8C2E4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ptcd1Q8C2E4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
Ptcd1Q8C2E4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC23.82■■□□□ 1.4
Ptcd1Q8C2E4 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ptcd1Q8C2E4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ptcd1Q8C2E4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ptcd1Q8C2E4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ptcd1Q8C2E4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Ptcd1Q8C2E4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ptcd1Q8C2E4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ptcd1Q8C2E4 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC23.81■■□□□ 1.4
Ptcd1Q8C2E4 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ptcd1Q8C2E4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC23.81■■□□□ 1.4
Ptcd1Q8C2E4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC23.81■■□□□ 1.4
Ptcd1Q8C2E4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ptcd1Q8C2E4 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ptcd1Q8C2E4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptcd1Q8C2E4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
Ptcd1Q8C2E4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptcd1Q8C2E4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC23.8■■□□□ 1.4
Ptcd1Q8C2E4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptcd1Q8C2E4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptcd1Q8C2E4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ptcd1Q8C2E4 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptcd1Q8C2E4 AC135963.1-201ENSMUST00000211640 717 ntBASIC23.79■■□□□ 1.4
Ptcd1Q8C2E4 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptcd1Q8C2E4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptcd1Q8C2E4 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptcd1Q8C2E4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptcd1Q8C2E4 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.79■■□□□ 1.4
Ptcd1Q8C2E4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptcd1Q8C2E4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ptcd1Q8C2E4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ptcd1Q8C2E4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ptcd1Q8C2E4 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ptcd1Q8C2E4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Ptcd1Q8C2E4 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ptcd1Q8C2E4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ptcd1Q8C2E4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ptcd1Q8C2E4 Gm6211-202ENSMUST00000167849 925 ntBASIC23.78■■□□□ 1.4
Ptcd1Q8C2E4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Ptcd1Q8C2E4 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC23.78■■□□□ 1.4
Ptcd1Q8C2E4 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ptcd1Q8C2E4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC23.78■■□□□ 1.4
Ptcd1Q8C2E4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ptcd1Q8C2E4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ptcd1Q8C2E4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ptcd1Q8C2E4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC23.77■■□□□ 1.4
Ptcd1Q8C2E4 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ptcd1Q8C2E4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ptcd1Q8C2E4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ptcd1Q8C2E4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC23.76■■□□□ 1.39
Ptcd1Q8C2E4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ptcd1Q8C2E4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ptcd1Q8C2E4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ptcd1Q8C2E4 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ptcd1Q8C2E4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC23.76■■□□□ 1.39
Ptcd1Q8C2E4 Trmt13-210ENSMUST00000198454 880 ntBASIC23.76■■□□□ 1.39
Ptcd1Q8C2E4 CT010467.1-202ENSMUST00000205406 714 ntBASIC23.76■■□□□ 1.39
Ptcd1Q8C2E4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC23.76■■□□□ 1.39
Ptcd1Q8C2E4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ptcd1Q8C2E4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Ptcd1Q8C2E4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ptcd1Q8C2E4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ptcd1Q8C2E4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Ptcd1Q8C2E4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Ptcd1Q8C2E4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Ptcd1Q8C2E4 Gm13181-201ENSMUST00000120117 1069 ntBASIC23.75■■□□□ 1.39
Ptcd1Q8C2E4 Gm38205-201ENSMUST00000192243 258 ntBASIC23.75■■□□□ 1.39
Ptcd1Q8C2E4 Gm44878-201ENSMUST00000205812 1295 ntBASIC23.75■■□□□ 1.39
Ptcd1Q8C2E4 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ptcd1Q8C2E4 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC23.75■■□□□ 1.39
Ptcd1Q8C2E4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
Ptcd1Q8C2E4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
Ptcd1Q8C2E4 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC23.74■■□□□ 1.39
Ptcd1Q8C2E4 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptcd1Q8C2E4 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptcd1Q8C2E4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptcd1Q8C2E4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Ptcd1Q8C2E4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.74■■□□□ 1.39
Ptcd1Q8C2E4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptcd1Q8C2E4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms