Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk3bQ80YF6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.3■□□□□ 0.2
Upk3bQ80YF6 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.3■□□□□ 0.2
Upk3bQ80YF6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk3bQ80YF6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Upk3bQ80YF6 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC16.3■□□□□ 0.2
Upk3bQ80YF6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.3■□□□□ 0.2
Upk3bQ80YF6 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Upk3bQ80YF6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk3bQ80YF6 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Upk3bQ80YF6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk3bQ80YF6 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk3bQ80YF6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Upk3bQ80YF6 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk3bQ80YF6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk3bQ80YF6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk3bQ80YF6 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Upk3bQ80YF6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.3■□□□□ 0.2
Upk3bQ80YF6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Upk3bQ80YF6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Upk3bQ80YF6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Upk3bQ80YF6 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Upk3bQ80YF6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.29■□□□□ 0.2
Upk3bQ80YF6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Upk3bQ80YF6 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Upk3bQ80YF6 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Upk3bQ80YF6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Upk3bQ80YF6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Upk3bQ80YF6 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Upk3bQ80YF6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Upk3bQ80YF6 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Upk3bQ80YF6 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Upk3bQ80YF6 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Upk3bQ80YF6 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.28■□□□□ 0.2
Upk3bQ80YF6 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.28■□□□□ 0.2
Upk3bQ80YF6 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.28■□□□□ 0.2
Upk3bQ80YF6 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.28■□□□□ 0.2
Upk3bQ80YF6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.28■□□□□ 0.2
Upk3bQ80YF6 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Upk3bQ80YF6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Upk3bQ80YF6 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.28■□□□□ 0.2
Upk3bQ80YF6 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Upk3bQ80YF6 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Upk3bQ80YF6 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Upk3bQ80YF6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Upk3bQ80YF6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Upk3bQ80YF6 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Upk3bQ80YF6 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Upk3bQ80YF6 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Upk3bQ80YF6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Upk3bQ80YF6 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Upk3bQ80YF6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Upk3bQ80YF6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Upk3bQ80YF6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Upk3bQ80YF6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Upk3bQ80YF6 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Upk3bQ80YF6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Upk3bQ80YF6 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.26■□□□□ 0.19
Upk3bQ80YF6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Upk3bQ80YF6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Upk3bQ80YF6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Upk3bQ80YF6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Upk3bQ80YF6 Gm7417-201ENSMUST00000192950 473 ntBASIC16.26■□□□□ 0.19
Upk3bQ80YF6 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Upk3bQ80YF6 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Upk3bQ80YF6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.26■□□□□ 0.19
Upk3bQ80YF6 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.26■□□□□ 0.19
Upk3bQ80YF6 Gm27045-201ENSMUST00000182145 1402 ntBASIC16.26■□□□□ 0.19
Upk3bQ80YF6 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Upk3bQ80YF6 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Upk3bQ80YF6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Upk3bQ80YF6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Upk3bQ80YF6 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Upk3bQ80YF6 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Upk3bQ80YF6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Upk3bQ80YF6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Upk3bQ80YF6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Upk3bQ80YF6 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Upk3bQ80YF6 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Upk3bQ80YF6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.25■□□□□ 0.19
Upk3bQ80YF6 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Upk3bQ80YF6 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Upk3bQ80YF6 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Upk3bQ80YF6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Upk3bQ80YF6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Upk3bQ80YF6 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Upk3bQ80YF6 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Upk3bQ80YF6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Upk3bQ80YF6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Upk3bQ80YF6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Gm42501-201ENSMUST00000200220 1026 ntBASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Upk3bQ80YF6 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms