Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Otop1Q80VM9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.5■□□□□ 0.55
Otop1Q80VM9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Otop1Q80VM9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Otop1Q80VM9 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Otop1Q80VM9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Otop1Q80VM9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Otop1Q80VM9 Gm22325-201ENSMUST00000158904 308 ntBASIC18.5■□□□□ 0.55
Otop1Q80VM9 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.5■□□□□ 0.55
Otop1Q80VM9 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.5■□□□□ 0.55
Otop1Q80VM9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Otop1Q80VM9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Otop1Q80VM9 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otop1Q80VM9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otop1Q80VM9 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.49■□□□□ 0.55
Otop1Q80VM9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.49■□□□□ 0.55
Otop1Q80VM9 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.49■□□□□ 0.55
Otop1Q80VM9 Gm20049-201ENSMUST00000219950 730 ntBASIC18.49■□□□□ 0.55
Otop1Q80VM9 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otop1Q80VM9 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Otop1Q80VM9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Otop1Q80VM9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Otop1Q80VM9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Otop1Q80VM9 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.48■□□□□ 0.55
Otop1Q80VM9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Otop1Q80VM9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Otop1Q80VM9 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.48■□□□□ 0.55
Otop1Q80VM9 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Otop1Q80VM9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Otop1Q80VM9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Otop1Q80VM9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Otop1Q80VM9 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Otop1Q80VM9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
Otop1Q80VM9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otop1Q80VM9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otop1Q80VM9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otop1Q80VM9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otop1Q80VM9 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Otop1Q80VM9 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otop1Q80VM9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otop1Q80VM9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.47■□□□□ 0.55
Otop1Q80VM9 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Otop1Q80VM9 Gm6420-201ENSMUST00000193885 723 ntBASIC18.47■□□□□ 0.55
Otop1Q80VM9 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otop1Q80VM9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Otop1Q80VM9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otop1Q80VM9 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otop1Q80VM9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Otop1Q80VM9 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.47■□□□□ 0.55
Otop1Q80VM9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otop1Q80VM9 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Otop1Q80VM9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otop1Q80VM9 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.46■□□□□ 0.55
Otop1Q80VM9 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otop1Q80VM9 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otop1Q80VM9 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Otop1Q80VM9 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otop1Q80VM9 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.46■□□□□ 0.55
Otop1Q80VM9 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Otop1Q80VM9 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.46■□□□□ 0.55
Otop1Q80VM9 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Otop1Q80VM9 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
Otop1Q80VM9 Gm10812-201ENSMUST00000099864 546 ntBASIC18.46■□□□□ 0.55
Otop1Q80VM9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otop1Q80VM9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otop1Q80VM9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.46■□□□□ 0.55
Otop1Q80VM9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.46■□□□□ 0.55
Otop1Q80VM9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otop1Q80VM9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otop1Q80VM9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otop1Q80VM9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Otop1Q80VM9 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otop1Q80VM9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otop1Q80VM9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otop1Q80VM9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Otop1Q80VM9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otop1Q80VM9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otop1Q80VM9 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.45■□□□□ 0.54
Otop1Q80VM9 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Otop1Q80VM9 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otop1Q80VM9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otop1Q80VM9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Otop1Q80VM9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otop1Q80VM9 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Otop1Q80VM9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Otop1Q80VM9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Otop1Q80VM9 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Otop1Q80VM9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Otop1Q80VM9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.44■□□□□ 0.54
Otop1Q80VM9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.44■□□□□ 0.54
Otop1Q80VM9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.44■□□□□ 0.54
Otop1Q80VM9 Gm38205-201ENSMUST00000192243 258 ntBASIC18.44■□□□□ 0.54
Otop1Q80VM9 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.44■□□□□ 0.54
Otop1Q80VM9 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.44■□□□□ 0.54
Otop1Q80VM9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Otop1Q80VM9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Otop1Q80VM9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Otop1Q80VM9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Otop1Q80VM9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Otop1Q80VM9 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms