Protein–RNA interactions for Protein: Q7TNM2

Trim46, Tripartite motif-containing protein 46, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim46Q7TNM2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim46Q7TNM2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim46Q7TNM2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim46Q7TNM2 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim46Q7TNM2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trim46Q7TNM2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim46Q7TNM2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim46Q7TNM2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trim46Q7TNM2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trim46Q7TNM2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim46Q7TNM2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.08■□□□□ 0.49
Trim46Q7TNM2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim46Q7TNM2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Trim46Q7TNM2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim46Q7TNM2 Gm8493-201ENSMUST00000196881 489 ntBASIC18.08■□□□□ 0.48
Trim46Q7TNM2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim46Q7TNM2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim46Q7TNM2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Trim46Q7TNM2 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim46Q7TNM2 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim46Q7TNM2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim46Q7TNM2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim46Q7TNM2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trim46Q7TNM2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim46Q7TNM2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim46Q7TNM2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim46Q7TNM2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Trim46Q7TNM2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.07■□□□□ 0.48
Trim46Q7TNM2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim46Q7TNM2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.07■□□□□ 0.48
Trim46Q7TNM2 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.07■□□□□ 0.48
Trim46Q7TNM2 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.07■□□□□ 0.48
Trim46Q7TNM2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim46Q7TNM2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim46Q7TNM2 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim46Q7TNM2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim46Q7TNM2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim46Q7TNM2 Gm43173-201ENSMUST00000202246 593 ntBASIC18.06■□□□□ 0.48
Trim46Q7TNM2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim46Q7TNM2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim46Q7TNM2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trim46Q7TNM2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim46Q7TNM2 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim46Q7TNM2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim46Q7TNM2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim46Q7TNM2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.05■□□□□ 0.48
Trim46Q7TNM2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim46Q7TNM2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim46Q7TNM2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim46Q7TNM2 Smad6-203ENSMUST00000179458 273 ntBASIC18.05■□□□□ 0.48
Trim46Q7TNM2 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim46Q7TNM2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim46Q7TNM2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim46Q7TNM2 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim46Q7TNM2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim46Q7TNM2 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim46Q7TNM2 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim46Q7TNM2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Trim46Q7TNM2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim46Q7TNM2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim46Q7TNM2 Gm6139-201ENSMUST00000079261 882 ntBASIC18.04■□□□□ 0.48
Trim46Q7TNM2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trim46Q7TNM2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim46Q7TNM2 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
Trim46Q7TNM2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim46Q7TNM2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trim46Q7TNM2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.03■□□□□ 0.48
Trim46Q7TNM2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trim46Q7TNM2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.03■□□□□ 0.48
Trim46Q7TNM2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim46Q7TNM2 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim46Q7TNM2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim46Q7TNM2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim46Q7TNM2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim46Q7TNM2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim46Q7TNM2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.02■□□□□ 0.48
Trim46Q7TNM2 Gm45417-201ENSMUST00000209533 758 ntBASIC18.02■□□□□ 0.48
Trim46Q7TNM2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim46Q7TNM2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.02■□□□□ 0.48
Trim46Q7TNM2 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Trim46Q7TNM2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trim46Q7TNM2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim46Q7TNM2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim46Q7TNM2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim46Q7TNM2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim46Q7TNM2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim46Q7TNM2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim46Q7TNM2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim46Q7TNM2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim46Q7TNM2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim46Q7TNM2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim46Q7TNM2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Trim46Q7TNM2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim46Q7TNM2 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.01■□□□□ 0.47
Trim46Q7TNM2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim46Q7TNM2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim46Q7TNM2 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.01■□□□□ 0.47
Trim46Q7TNM2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.01■□□□□ 0.47
Trim46Q7TNM2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
Trim46Q7TNM2 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms