Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC21.29■■□□□ 1
Kdm1aQ6ZQ88 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Kdm1aQ6ZQ88 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.29■■□□□ 1
Kdm1aQ6ZQ88 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Kdm1aQ6ZQ88 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Kdm1aQ6ZQ88 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Kdm1aQ6ZQ88 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Kdm1aQ6ZQ88 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21.28■■□□□ 1
Kdm1aQ6ZQ88 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC21.28■■□□□ 1
Kdm1aQ6ZQ88 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.28■■□□□ 1
Kdm1aQ6ZQ88 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm1aQ6ZQ88 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.28■■□□□ 1
Kdm1aQ6ZQ88 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm1aQ6ZQ88 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm1aQ6ZQ88 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm1aQ6ZQ88 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm1aQ6ZQ88 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Kdm1aQ6ZQ88 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.28■■□□□ 1
Kdm1aQ6ZQ88 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.28■■□□□ 1
Kdm1aQ6ZQ88 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm1aQ6ZQ88 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm1aQ6ZQ88 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.27■■□□□ 1
Kdm1aQ6ZQ88 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.27■■□□□ 1
Kdm1aQ6ZQ88 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm1aQ6ZQ88 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Kdm1aQ6ZQ88 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Kdm1aQ6ZQ88 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Kdm1aQ6ZQ88 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
Kdm1aQ6ZQ88 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Kdm1aQ6ZQ88 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.26■□□□□ 0.99
Kdm1aQ6ZQ88 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.26■□□□□ 0.99
Kdm1aQ6ZQ88 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Kdm1aQ6ZQ88 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Kdm1aQ6ZQ88 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Kdm1aQ6ZQ88 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Kdm1aQ6ZQ88 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Kdm1aQ6ZQ88 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Kdm1aQ6ZQ88 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Kdm1aQ6ZQ88 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.25■□□□□ 0.99
Kdm1aQ6ZQ88 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Kdm1aQ6ZQ88 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Kdm1aQ6ZQ88 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Kdm1aQ6ZQ88 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Kdm1aQ6ZQ88 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Kdm1aQ6ZQ88 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kdm1aQ6ZQ88 Gm12251-201ENSMUST00000117893 792 ntBASIC21.24■□□□□ 0.99
Kdm1aQ6ZQ88 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.24■□□□□ 0.99
Kdm1aQ6ZQ88 Gm32699-201ENSMUST00000221728 1988 ntBASIC21.24■□□□□ 0.99
Kdm1aQ6ZQ88 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kdm1aQ6ZQ88 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kdm1aQ6ZQ88 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Kdm1aQ6ZQ88 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.24■□□□□ 0.99
Kdm1aQ6ZQ88 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Kdm1aQ6ZQ88 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1aQ6ZQ88 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1aQ6ZQ88 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1aQ6ZQ88 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Kdm1aQ6ZQ88 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.23■□□□□ 0.99
Kdm1aQ6ZQ88 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1aQ6ZQ88 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1aQ6ZQ88 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Kdm1aQ6ZQ88 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1aQ6ZQ88 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1aQ6ZQ88 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1aQ6ZQ88 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1aQ6ZQ88 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1aQ6ZQ88 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1aQ6ZQ88 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Kdm1aQ6ZQ88 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.22■□□□□ 0.99
Kdm1aQ6ZQ88 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Kdm1aQ6ZQ88 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Kdm1aQ6ZQ88 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Kdm1aQ6ZQ88 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Kdm1aQ6ZQ88 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Kdm1aQ6ZQ88 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Kdm1aQ6ZQ88 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Kdm1aQ6ZQ88 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.22■□□□□ 0.99
Kdm1aQ6ZQ88 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Kdm1aQ6ZQ88 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Kdm1aQ6ZQ88 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Kdm1aQ6ZQ88 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Kdm1aQ6ZQ88 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Kdm1aQ6ZQ88 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Kdm1aQ6ZQ88 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Kdm1aQ6ZQ88 AC124603.1-201ENSMUST00000223843 308 ntBASIC21.21■□□□□ 0.99
Kdm1aQ6ZQ88 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Kdm1aQ6ZQ88 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC21.21■□□□□ 0.99
Kdm1aQ6ZQ88 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Kdm1aQ6ZQ88 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Kdm1aQ6ZQ88 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Kdm1aQ6ZQ88 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.2■□□□□ 0.98
Kdm1aQ6ZQ88 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Kdm1aQ6ZQ88 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Kdm1aQ6ZQ88 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Kdm1aQ6ZQ88 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC21.2■□□□□ 0.98
Kdm1aQ6ZQ88 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Kdm1aQ6ZQ88 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Kdm1aQ6ZQ88 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Kdm1aQ6ZQ88 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Kdm1aQ6ZQ88 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms