Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Snrnp40Q6PE01 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Snrnp40Q6PE01 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snrnp40Q6PE01 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Snrnp40Q6PE01 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snrnp40Q6PE01 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Snrnp40Q6PE01 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snrnp40Q6PE01 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Snrnp40Q6PE01 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Snrnp40Q6PE01 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.04■□□□□ 0.32
Snrnp40Q6PE01 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snrnp40Q6PE01 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snrnp40Q6PE01 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snrnp40Q6PE01 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snrnp40Q6PE01 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snrnp40Q6PE01 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snrnp40Q6PE01 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snrnp40Q6PE01 Gm7860-201ENSMUST00000121190 879 ntBASIC17.04■□□□□ 0.32
Snrnp40Q6PE01 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Snrnp40Q6PE01 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Snrnp40Q6PE01 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.04■□□□□ 0.32
Snrnp40Q6PE01 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.04■□□□□ 0.32
Snrnp40Q6PE01 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Snrnp40Q6PE01 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Snrnp40Q6PE01 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snrnp40Q6PE01 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Snrnp40Q6PE01 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Gm27275-201ENSMUST00000184318 272 ntBASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Snrnp40Q6PE01 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Snrnp40Q6PE01 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snrnp40Q6PE01 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snrnp40Q6PE01 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Snrnp40Q6PE01 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Snrnp40Q6PE01 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.02■□□□□ 0.32
Snrnp40Q6PE01 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.02■□□□□ 0.32
Snrnp40Q6PE01 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.02■□□□□ 0.32
Snrnp40Q6PE01 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.02■□□□□ 0.32
Snrnp40Q6PE01 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snrnp40Q6PE01 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Snrnp40Q6PE01 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snrnp40Q6PE01 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Snrnp40Q6PE01 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.31
Snrnp40Q6PE01 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Snrnp40Q6PE01 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Snrnp40Q6PE01 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Snrnp40Q6PE01 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.01■□□□□ 0.31
Snrnp40Q6PE01 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Snrnp40Q6PE01 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.01■□□□□ 0.31
Snrnp40Q6PE01 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.01■□□□□ 0.31
Snrnp40Q6PE01 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.01■□□□□ 0.31
Snrnp40Q6PE01 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Snrnp40Q6PE01 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Snrnp40Q6PE01 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Snrnp40Q6PE01 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Snrnp40Q6PE01 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Snrnp40Q6PE01 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Snrnp40Q6PE01 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Snrnp40Q6PE01 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Snrnp40Q6PE01 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Snrnp40Q6PE01 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Snrnp40Q6PE01 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC17■□□□□ 0.31
Snrnp40Q6PE01 Gm12896-201ENSMUST00000118430 226 ntBASIC17■□□□□ 0.31
Snrnp40Q6PE01 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17■□□□□ 0.31
Snrnp40Q6PE01 Gm7977-201ENSMUST00000193787 748 ntBASIC17■□□□□ 0.31
Snrnp40Q6PE01 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Snrnp40Q6PE01 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17■□□□□ 0.31
Snrnp40Q6PE01 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Snrnp40Q6PE01 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Snrnp40Q6PE01 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17■□□□□ 0.31
Snrnp40Q6PE01 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Snrnp40Q6PE01 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Snrnp40Q6PE01 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Snrnp40Q6PE01 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Snrnp40Q6PE01 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Snrnp40Q6PE01 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Snrnp40Q6PE01 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Snrnp40Q6PE01 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms