Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
ShbQ6PD21 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ShbQ6PD21 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
ShbQ6PD21 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC21.2■□□□□ 0.98
ShbQ6PD21 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC21.2■□□□□ 0.98
ShbQ6PD21 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ShbQ6PD21 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ShbQ6PD21 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.2■□□□□ 0.98
ShbQ6PD21 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
ShbQ6PD21 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
ShbQ6PD21 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShbQ6PD21 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShbQ6PD21 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.19■□□□□ 0.98
ShbQ6PD21 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShbQ6PD21 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ShbQ6PD21 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShbQ6PD21 Gm15378-201ENSMUST00000121894 207 ntBASIC21.19■□□□□ 0.98
ShbQ6PD21 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
ShbQ6PD21 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShbQ6PD21 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShbQ6PD21 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShbQ6PD21 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShbQ6PD21 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShbQ6PD21 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShbQ6PD21 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ShbQ6PD21 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.19■□□□□ 0.98
ShbQ6PD21 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ShbQ6PD21 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShbQ6PD21 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShbQ6PD21 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShbQ6PD21 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShbQ6PD21 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ShbQ6PD21 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShbQ6PD21 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShbQ6PD21 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ShbQ6PD21 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ShbQ6PD21 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ShbQ6PD21 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
ShbQ6PD21 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ShbQ6PD21 Gm44549-201ENSMUST00000208351 577 ntBASIC21.17■□□□□ 0.98
ShbQ6PD21 AC153881.2-201ENSMUST00000214877 204 ntBASIC21.17■□□□□ 0.98
ShbQ6PD21 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
ShbQ6PD21 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.17■□□□□ 0.98
ShbQ6PD21 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ShbQ6PD21 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShbQ6PD21 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ShbQ6PD21 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShbQ6PD21 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShbQ6PD21 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ShbQ6PD21 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShbQ6PD21 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ShbQ6PD21 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ShbQ6PD21 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShbQ6PD21 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ShbQ6PD21 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ShbQ6PD21 CT010444.2-201ENSMUST00000217877 1629 ntBASIC21.15■□□□□ 0.98
ShbQ6PD21 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ShbQ6PD21 Gm10231-201ENSMUST00000181584 441 ntBASIC21.15■□□□□ 0.98
ShbQ6PD21 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ShbQ6PD21 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ShbQ6PD21 Gm10175-202ENSMUST00000208752 441 ntBASIC21.15■□□□□ 0.98
ShbQ6PD21 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ShbQ6PD21 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ShbQ6PD21 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ShbQ6PD21 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ShbQ6PD21 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
ShbQ6PD21 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ShbQ6PD21 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ShbQ6PD21 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ShbQ6PD21 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ShbQ6PD21 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ShbQ6PD21 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ShbQ6PD21 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ShbQ6PD21 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ShbQ6PD21 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
ShbQ6PD21 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ShbQ6PD21 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ShbQ6PD21 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC21.14■□□□□ 0.97
ShbQ6PD21 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.14■□□□□ 0.97
ShbQ6PD21 H2-K2-201ENSMUST00000174250 1049 ntBASIC21.14■□□□□ 0.97
ShbQ6PD21 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.14■□□□□ 0.97
ShbQ6PD21 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ShbQ6PD21 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ShbQ6PD21 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ShbQ6PD21 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ShbQ6PD21 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ShbQ6PD21 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ShbQ6PD21 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ShbQ6PD21 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC21.12■□□□□ 0.97
ShbQ6PD21 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC21.12■□□□□ 0.97
ShbQ6PD21 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.12■□□□□ 0.97
ShbQ6PD21 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ShbQ6PD21 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ShbQ6PD21 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ShbQ6PD21 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ShbQ6PD21 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ShbQ6PD21 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ShbQ6PD21 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ShbQ6PD21 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ShbQ6PD21 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms