Protein–RNA interactions for Protein: Q6P8X1

Snx6, Sorting nexin-6, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx6Q6P8X1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snx6Q6P8X1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snx6Q6P8X1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Snx6Q6P8X1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snx6Q6P8X1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snx6Q6P8X1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snx6Q6P8X1 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snx6Q6P8X1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snx6Q6P8X1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Snx6Q6P8X1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Snx6Q6P8X1 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snx6Q6P8X1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Snx6Q6P8X1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Snx6Q6P8X1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Snx6Q6P8X1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Snx6Q6P8X1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Snx6Q6P8X1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Snx6Q6P8X1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Snx6Q6P8X1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.35■□□□□ 0.53
Snx6Q6P8X1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.35■□□□□ 0.53
Snx6Q6P8X1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Snx6Q6P8X1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Snx6Q6P8X1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snx6Q6P8X1 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Snx6Q6P8X1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Snx6Q6P8X1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snx6Q6P8X1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Snx6Q6P8X1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snx6Q6P8X1 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snx6Q6P8X1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.34■□□□□ 0.53
Snx6Q6P8X1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snx6Q6P8X1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snx6Q6P8X1 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snx6Q6P8X1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Snx6Q6P8X1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.34■□□□□ 0.53
Snx6Q6P8X1 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snx6Q6P8X1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Snx6Q6P8X1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Snx6Q6P8X1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Snx6Q6P8X1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.33■□□□□ 0.53
Snx6Q6P8X1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Snx6Q6P8X1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Snx6Q6P8X1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Snx6Q6P8X1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Snx6Q6P8X1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Snx6Q6P8X1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.33■□□□□ 0.52
Snx6Q6P8X1 Serp2-204ENSMUST00000228055 705 ntBASIC18.33■□□□□ 0.52
Snx6Q6P8X1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Snx6Q6P8X1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Snx6Q6P8X1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Snx6Q6P8X1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Snx6Q6P8X1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snx6Q6P8X1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snx6Q6P8X1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.32■□□□□ 0.52
Snx6Q6P8X1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Snx6Q6P8X1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snx6Q6P8X1 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snx6Q6P8X1 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.32■□□□□ 0.52
Snx6Q6P8X1 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Snx6Q6P8X1 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.32■□□□□ 0.52
Snx6Q6P8X1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snx6Q6P8X1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snx6Q6P8X1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.32■□□□□ 0.52
Snx6Q6P8X1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snx6Q6P8X1 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Snx6Q6P8X1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx6Q6P8X1 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.31■□□□□ 0.52
Snx6Q6P8X1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx6Q6P8X1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx6Q6P8X1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Snx6Q6P8X1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.31■□□□□ 0.52
Snx6Q6P8X1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx6Q6P8X1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Snx6Q6P8X1 Mir7075-201ENSMUST00000184187 82 ntBASIC18.31■□□□□ 0.52
Snx6Q6P8X1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Snx6Q6P8X1 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.31■□□□□ 0.52
Snx6Q6P8X1 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.31■□□□□ 0.52
Snx6Q6P8X1 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Snx6Q6P8X1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Snx6Q6P8X1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx6Q6P8X1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Snx6Q6P8X1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx6Q6P8X1 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx6Q6P8X1 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.3■□□□□ 0.52
Snx6Q6P8X1 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx6Q6P8X1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.3■□□□□ 0.52
Snx6Q6P8X1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.3■□□□□ 0.52
Snx6Q6P8X1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx6Q6P8X1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Snx6Q6P8X1 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.3■□□□□ 0.52
Snx6Q6P8X1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Snx6Q6P8X1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx6Q6P8X1 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx6Q6P8X1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Snx6Q6P8X1 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Snx6Q6P8X1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Snx6Q6P8X1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snx6Q6P8X1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Snx6Q6P8X1 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Snx6Q6P8X1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms