Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retreg2Q6NS82 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retreg2Q6NS82 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Retreg2Q6NS82 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Retreg2Q6NS82 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retreg2Q6NS82 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retreg2Q6NS82 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Retreg2Q6NS82 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retreg2Q6NS82 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Retreg2Q6NS82 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retreg2Q6NS82 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retreg2Q6NS82 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.69■□□□□ 0.9
Retreg2Q6NS82 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retreg2Q6NS82 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg2Q6NS82 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg2Q6NS82 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.68■□□□□ 0.9
Retreg2Q6NS82 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg2Q6NS82 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg2Q6NS82 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg2Q6NS82 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg2Q6NS82 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg2Q6NS82 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg2Q6NS82 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.68■□□□□ 0.9
Retreg2Q6NS82 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg2Q6NS82 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Retreg2Q6NS82 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg2Q6NS82 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.68■□□□□ 0.9
Retreg2Q6NS82 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retreg2Q6NS82 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retreg2Q6NS82 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Retreg2Q6NS82 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.67■□□□□ 0.9
Retreg2Q6NS82 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retreg2Q6NS82 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.67■□□□□ 0.9
Retreg2Q6NS82 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retreg2Q6NS82 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retreg2Q6NS82 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retreg2Q6NS82 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retreg2Q6NS82 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retreg2Q6NS82 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Retreg2Q6NS82 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.66■□□□□ 0.9
Retreg2Q6NS82 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retreg2Q6NS82 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.66■□□□□ 0.9
Retreg2Q6NS82 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retreg2Q6NS82 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retreg2Q6NS82 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retreg2Q6NS82 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
Retreg2Q6NS82 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retreg2Q6NS82 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retreg2Q6NS82 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retreg2Q6NS82 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retreg2Q6NS82 Smad6-203ENSMUST00000179458 273 ntBASIC20.65■□□□□ 0.9
Retreg2Q6NS82 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retreg2Q6NS82 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retreg2Q6NS82 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.65■□□□□ 0.9
Retreg2Q6NS82 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Retreg2Q6NS82 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Retreg2Q6NS82 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Retreg2Q6NS82 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.64■□□□□ 0.9
Retreg2Q6NS82 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Retreg2Q6NS82 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retreg2Q6NS82 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Retreg2Q6NS82 Gm26571-201ENSMUST00000181399 666 ntBASIC20.64■□□□□ 0.89
Retreg2Q6NS82 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.64■□□□□ 0.89
Retreg2Q6NS82 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
Retreg2Q6NS82 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.64■□□□□ 0.89
Retreg2Q6NS82 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Retreg2Q6NS82 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retreg2Q6NS82 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retreg2Q6NS82 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg2Q6NS82 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg2Q6NS82 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Retreg2Q6NS82 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg2Q6NS82 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.63■□□□□ 0.89
Retreg2Q6NS82 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg2Q6NS82 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg2Q6NS82 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg2Q6NS82 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg2Q6NS82 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg2Q6NS82 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg2Q6NS82 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retreg2Q6NS82 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.63■□□□□ 0.89
Retreg2Q6NS82 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg2Q6NS82 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg2Q6NS82 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg2Q6NS82 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg2Q6NS82 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.62■□□□□ 0.89
Retreg2Q6NS82 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg2Q6NS82 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg2Q6NS82 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retreg2Q6NS82 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg2Q6NS82 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg2Q6NS82 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg2Q6NS82 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg2Q6NS82 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg2Q6NS82 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg2Q6NS82 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg2Q6NS82 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Retreg2Q6NS82 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg2Q6NS82 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retreg2Q6NS82 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms