Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Gm45417-201ENSMUST00000209533 758 ntBASIC20.64■□□□□ 0.89
Six2Q62232 Gm6139-201ENSMUST00000079261 882 ntBASIC20.64■□□□□ 0.89
Six2Q62232 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.64■□□□□ 0.89
Six2Q62232 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Six2Q62232 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Six2Q62232 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Six2Q62232 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Six2Q62232 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Six2Q62232 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Six2Q62232 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Six2Q62232 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.63■□□□□ 0.89
Six2Q62232 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Six2Q62232 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Six2Q62232 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Six2Q62232 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Six2Q62232 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Six2Q62232 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six2Q62232 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six2Q62232 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six2Q62232 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Six2Q62232 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six2Q62232 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six2Q62232 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Six2Q62232 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six2Q62232 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Six2Q62232 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six2Q62232 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Six2Q62232 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six2Q62232 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.61■□□□□ 0.89
Six2Q62232 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six2Q62232 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six2Q62232 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six2Q62232 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Six2Q62232 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.6■□□□□ 0.89
Six2Q62232 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.6■□□□□ 0.89
Six2Q62232 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Six2Q62232 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Six2Q62232 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Six2Q62232 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Six2Q62232 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Six2Q62232 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Six2Q62232 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Six2Q62232 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Six2Q62232 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.6■□□□□ 0.89
Six2Q62232 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Six2Q62232 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Six2Q62232 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Six2Q62232 Golph3-205ENSMUST00000228671 2842 ntBASIC20.6■□□□□ 0.89
Six2Q62232 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.6■□□□□ 0.89
Six2Q62232 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Six2Q62232 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Six2Q62232 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Six2Q62232 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Six2Q62232 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Six2Q62232 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Six2Q62232 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Six2Q62232 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Six2Q62232 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Six2Q62232 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Six2Q62232 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Six2Q62232 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Six2Q62232 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Six2Q62232 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Six2Q62232 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Six2Q62232 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Six2Q62232 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Six2Q62232 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Six2Q62232 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.58■□□□□ 0.89
Six2Q62232 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Six2Q62232 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Six2Q62232 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Six2Q62232 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Six2Q62232 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Six2Q62232 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Six2Q62232 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Six2Q62232 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
Six2Q62232 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Six2Q62232 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Six2Q62232 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Six2Q62232 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Six2Q62232 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Six2Q62232 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Six2Q62232 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Six2Q62232 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
Six2Q62232 Gm11421-201ENSMUST00000122124 294 ntBASIC20.56■□□□□ 0.88
Six2Q62232 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.56■□□□□ 0.88
Six2Q62232 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Six2Q62232 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.56■□□□□ 0.88
Six2Q62232 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Six2Q62232 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Six2Q62232 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Six2Q62232 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Six2Q62232 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Six2Q62232 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Six2Q62232 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Six2Q62232 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.55■□□□□ 0.88
Six2Q62232 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Six2Q62232 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Six2Q62232 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Six2Q62232 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms