Protein–RNA interactions for Protein: Q62191

Trim21, E3 ubiquitin-protein ligase TRIM21, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21Q62191 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim21Q62191 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim21Q62191 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim21Q62191 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim21Q62191 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim21Q62191 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim21Q62191 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim21Q62191 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim21Q62191 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim21Q62191 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trim21Q62191 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim21Q62191 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trim21Q62191 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim21Q62191 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim21Q62191 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim21Q62191 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim21Q62191 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim21Q62191 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim21Q62191 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Trim21Q62191 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim21Q62191 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim21Q62191 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim21Q62191 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim21Q62191 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim21Q62191 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim21Q62191 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim21Q62191 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim21Q62191 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim21Q62191 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim21Q62191 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim21Q62191 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Trim21Q62191 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim21Q62191 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim21Q62191 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
Trim21Q62191 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim21Q62191 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim21Q62191 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Trim21Q62191 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim21Q62191 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim21Q62191 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.23■□□□□ 0.83
Trim21Q62191 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim21Q62191 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.23■□□□□ 0.83
Trim21Q62191 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim21Q62191 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim21Q62191 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim21Q62191 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim21Q62191 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim21Q62191 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim21Q62191 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim21Q62191 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim21Q62191 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim21Q62191 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim21Q62191 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trim21Q62191 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.22■□□□□ 0.83
Trim21Q62191 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
Trim21Q62191 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trim21Q62191 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim21Q62191 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Trim21Q62191 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim21Q62191 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim21Q62191 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.21■□□□□ 0.83
Trim21Q62191 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim21Q62191 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.83
Trim21Q62191 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim21Q62191 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim21Q62191 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim21Q62191 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim21Q62191 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim21Q62191 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim21Q62191 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim21Q62191 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim21Q62191 Serp2-204ENSMUST00000228055 705 ntBASIC20.2■□□□□ 0.82
Trim21Q62191 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim21Q62191 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim21Q62191 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim21Q62191 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim21Q62191 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Trim21Q62191 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim21Q62191 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim21Q62191 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim21Q62191 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim21Q62191 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.2■□□□□ 0.82
Trim21Q62191 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim21Q62191 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Trim21Q62191 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.19■□□□□ 0.82
Trim21Q62191 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Trim21Q62191 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim21Q62191 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trim21Q62191 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trim21Q62191 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim21Q62191 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim21Q62191 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim21Q62191 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim21Q62191 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
Trim21Q62191 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim21Q62191 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim21Q62191 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim21Q62191 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim21Q62191 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.18■□□□□ 0.82
Trim21Q62191 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms