Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rai1Q61818 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rai1Q61818 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rai1Q61818 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.84■□□□□ 0.61
Rai1Q61818 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rai1Q61818 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rai1Q61818 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rai1Q61818 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Rai1Q61818 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rai1Q61818 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rai1Q61818 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rai1Q61818 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rai1Q61818 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.83■□□□□ 0.6
Rai1Q61818 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.83■□□□□ 0.6
Rai1Q61818 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rai1Q61818 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rai1Q61818 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rai1Q61818 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rai1Q61818 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.82■□□□□ 0.6
Rai1Q61818 Rab3c-203ENSMUST00000224180 967 ntBASIC18.82■□□□□ 0.6
Rai1Q61818 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rai1Q61818 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.82■□□□□ 0.6
Rai1Q61818 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rai1Q61818 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Rai1Q61818 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rai1Q61818 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rai1Q61818 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rai1Q61818 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rai1Q61818 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rai1Q61818 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.82■□□□□ 0.6
Rai1Q61818 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.81■□□□□ 0.6
Rai1Q61818 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Rai1Q61818 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rai1Q61818 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rai1Q61818 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rai1Q61818 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.81■□□□□ 0.6
Rai1Q61818 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.81■□□□□ 0.6
Rai1Q61818 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rai1Q61818 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rai1Q61818 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.8■□□□□ 0.6
Rai1Q61818 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Rai1Q61818 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rai1Q61818 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rai1Q61818 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rai1Q61818 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rai1Q61818 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rai1Q61818 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.8■□□□□ 0.6
Rai1Q61818 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rai1Q61818 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rai1Q61818 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rai1Q61818 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rai1Q61818 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rai1Q61818 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rai1Q61818 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rai1Q61818 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rai1Q61818 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.79■□□□□ 0.6
Rai1Q61818 Gm27275-201ENSMUST00000184318 272 ntBASIC18.79■□□□□ 0.6
Rai1Q61818 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rai1Q61818 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rai1Q61818 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rai1Q61818 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.78■□□□□ 0.6
Rai1Q61818 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rai1Q61818 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rai1Q61818 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rai1Q61818 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.78■□□□□ 0.6
Rai1Q61818 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rai1Q61818 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.77■□□□□ 0.6
Rai1Q61818 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rai1Q61818 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rai1Q61818 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rai1Q61818 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rai1Q61818 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rai1Q61818 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.77■□□□□ 0.6
Rai1Q61818 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.77■□□□□ 0.6
Rai1Q61818 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rai1Q61818 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Rai1Q61818 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rai1Q61818 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rai1Q61818 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rai1Q61818 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rai1Q61818 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rai1Q61818 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rai1Q61818 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rai1Q61818 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rai1Q61818 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.76■□□□□ 0.59
Rai1Q61818 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.76■□□□□ 0.59
Rai1Q61818 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rai1Q61818 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rai1Q61818 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rai1Q61818 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Rai1Q61818 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rai1Q61818 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.75■□□□□ 0.59
Rai1Q61818 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rai1Q61818 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rai1Q61818 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rai1Q61818 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.75■□□□□ 0.59
Rai1Q61818 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rai1Q61818 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.75■□□□□ 0.59
Rai1Q61818 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rai1Q61818 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms