Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.05□□□□□ -0.16
Foxc1Q61572 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxc1Q61572 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxc1Q61572 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.05□□□□□ -0.16
Foxc1Q61572 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxc1Q61572 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxc1Q61572 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Foxc1Q61572 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.05□□□□□ -0.16
Foxc1Q61572 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Foxc1Q61572 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxc1Q61572 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Foxc1Q61572 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Foxc1Q61572 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxc1Q61572 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Foxc1Q61572 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Foxc1Q61572 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxc1Q61572 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxc1Q61572 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Foxc1Q61572 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxc1Q61572 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxc1Q61572 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxc1Q61572 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxc1Q61572 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxc1Q61572 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Foxc1Q61572 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxc1Q61572 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxc1Q61572 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Foxc1Q61572 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Foxc1Q61572 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.03□□□□□ -0.16
Foxc1Q61572 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxc1Q61572 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxc1Q61572 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxc1Q61572 Gm26833-201ENSMUST00000180899 440 ntBASIC14.03□□□□□ -0.16
Foxc1Q61572 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxc1Q61572 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Foxc1Q61572 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxc1Q61572 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Foxc1Q61572 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Foxc1Q61572 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxc1Q61572 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Foxc1Q61572 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxc1Q61572 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxc1Q61572 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxc1Q61572 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxc1Q61572 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxc1Q61572 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Foxc1Q61572 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Foxc1Q61572 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxc1Q61572 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxc1Q61572 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Foxc1Q61572 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Foxc1Q61572 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Foxc1Q61572 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Foxc1Q61572 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Foxc1Q61572 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Foxc1Q61572 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.02□□□□□ -0.17
Foxc1Q61572 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxc1Q61572 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Foxc1Q61572 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxc1Q61572 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxc1Q61572 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxc1Q61572 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.01□□□□□ -0.17
Foxc1Q61572 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Foxc1Q61572 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxc1Q61572 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxc1Q61572 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Foxc1Q61572 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxc1Q61572 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Foxc1Q61572 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxc1Q61572 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxc1Q61572 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxc1Q61572 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxc1Q61572 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxc1Q61572 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxc1Q61572 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.01□□□□□ -0.17
Foxc1Q61572 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxc1Q61572 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxc1Q61572 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxc1Q61572 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Foxc1Q61572 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC14.01□□□□□ -0.17
Foxc1Q61572 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxc1Q61572 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxc1Q61572 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Foxc1Q61572 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Foxc1Q61572 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14□□□□□ -0.17
Foxc1Q61572 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxc1Q61572 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxc1Q61572 Gm37035-201ENSMUST00000194809 2148 ntBASIC14□□□□□ -0.17
Foxc1Q61572 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Foxc1Q61572 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxc1Q61572 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxc1Q61572 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxc1Q61572 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxc1Q61572 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14□□□□□ -0.17
Foxc1Q61572 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC14□□□□□ -0.17
Foxc1Q61572 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
Foxc1Q61572 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxc1Q61572 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Foxc1Q61572 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14□□□□□ -0.17
Foxc1Q61572 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms