Protein–RNA interactions for Protein: Q61496

Ddx4, ATP-dependent RNA helicase DDX4, mousemouse

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx4Q61496 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx4Q61496 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx4Q61496 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.32■■□□□ 1
Ddx4Q61496 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ddx4Q61496 AC130671.1-201ENSMUST00000227384 1237 ntBASIC21.32■■□□□ 1
Ddx4Q61496 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx4Q61496 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx4Q61496 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
Ddx4Q61496 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.32■■□□□ 1
Ddx4Q61496 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Ddx4Q61496 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx4Q61496 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx4Q61496 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
Ddx4Q61496 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Ddx4Q61496 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx4Q61496 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC21.31■■□□□ 1
Ddx4Q61496 Gm27275-201ENSMUST00000184318 272 ntBASIC21.31■■□□□ 1
Ddx4Q61496 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx4Q61496 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx4Q61496 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Ddx4Q61496 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.31■■□□□ 1
Ddx4Q61496 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Ddx4Q61496 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ddx4Q61496 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Ddx4Q61496 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ddx4Q61496 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.3■■□□□ 1
Ddx4Q61496 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Ddx4Q61496 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.3■■□□□ 1
Ddx4Q61496 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC21.3■■□□□ 1
Ddx4Q61496 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
Ddx4Q61496 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx4Q61496 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.3■■□□□ 1
Ddx4Q61496 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.3■■□□□ 1
Ddx4Q61496 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Ddx4Q61496 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx4Q61496 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Ddx4Q61496 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ddx4Q61496 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx4Q61496 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Ddx4Q61496 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ddx4Q61496 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx4Q61496 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC21.29■■□□□ 1
Ddx4Q61496 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ddx4Q61496 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ddx4Q61496 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Ddx4Q61496 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.29■■□□□ 1
Ddx4Q61496 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx4Q61496 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ddx4Q61496 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.29■■□□□ 1
Ddx4Q61496 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ddx4Q61496 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Ddx4Q61496 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Ddx4Q61496 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.28■■□□□ 1
Ddx4Q61496 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.28■■□□□ 1
Ddx4Q61496 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx4Q61496 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx4Q61496 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx4Q61496 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Ddx4Q61496 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx4Q61496 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC21.27■■□□□ 1
Ddx4Q61496 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Ddx4Q61496 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ddx4Q61496 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Ddx4Q61496 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx4Q61496 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.26■□□□□ 0.99
Ddx4Q61496 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.26■□□□□ 0.99
Ddx4Q61496 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx4Q61496 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Ddx4Q61496 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx4Q61496 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx4Q61496 Gm12896-201ENSMUST00000118430 226 ntBASIC21.26■□□□□ 0.99
Ddx4Q61496 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx4Q61496 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Ddx4Q61496 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx4Q61496 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx4Q61496 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Ddx4Q61496 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.26■□□□□ 0.99
Ddx4Q61496 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Ddx4Q61496 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
Ddx4Q61496 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx4Q61496 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx4Q61496 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx4Q61496 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.25■□□□□ 0.99
Ddx4Q61496 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.25■□□□□ 0.99
Ddx4Q61496 Gm6576-201ENSMUST00000169678 883 ntBASIC21.25■□□□□ 0.99
Ddx4Q61496 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.25■□□□□ 0.99
Ddx4Q61496 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx4Q61496 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx4Q61496 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC21.25■□□□□ 0.99
Ddx4Q61496 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx4Q61496 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx4Q61496 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ddx4Q61496 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx4Q61496 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx4Q61496 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx4Q61496 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Ddx4Q61496 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.24■□□□□ 0.99
Ddx4Q61496 Arhgef33-211ENSMUST00000225658 473 ntBASIC21.24■□□□□ 0.99
Ddx4Q61496 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Ddx4Q61496 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms