Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.67■□□□□ 0.74
Foxd4Q60688 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Foxd4Q60688 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Foxd4Q60688 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Foxd4Q60688 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd4Q60688 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd4Q60688 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd4Q60688 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd4Q60688 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.66■□□□□ 0.74
Foxd4Q60688 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd4Q60688 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.66■□□□□ 0.74
Foxd4Q60688 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.66■□□□□ 0.74
Foxd4Q60688 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd4Q60688 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
Foxd4Q60688 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.66■□□□□ 0.74
Foxd4Q60688 Golgb1-201ENSMUST00000023534 498 ntBASIC19.66■□□□□ 0.74
Foxd4Q60688 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd4Q60688 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Foxd4Q60688 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd4Q60688 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd4Q60688 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd4Q60688 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd4Q60688 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Foxd4Q60688 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Foxd4Q60688 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Foxd4Q60688 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxd4Q60688 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxd4Q60688 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
Foxd4Q60688 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.65■□□□□ 0.74
Foxd4Q60688 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.65■□□□□ 0.74
Foxd4Q60688 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Foxd4Q60688 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxd4Q60688 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.65■□□□□ 0.74
Foxd4Q60688 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Foxd4Q60688 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Foxd4Q60688 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Foxd4Q60688 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Foxd4Q60688 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Foxd4Q60688 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Foxd4Q60688 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Foxd4Q60688 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Foxd4Q60688 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Foxd4Q60688 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Foxd4Q60688 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Foxd4Q60688 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Foxd4Q60688 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Foxd4Q60688 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Foxd4Q60688 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd4Q60688 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd4Q60688 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd4Q60688 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.63■□□□□ 0.73
Foxd4Q60688 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd4Q60688 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Foxd4Q60688 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd4Q60688 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.63■□□□□ 0.73
Foxd4Q60688 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd4Q60688 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd4Q60688 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Foxd4Q60688 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Foxd4Q60688 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Foxd4Q60688 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Foxd4Q60688 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Foxd4Q60688 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.62■□□□□ 0.73
Foxd4Q60688 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Foxd4Q60688 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.62■□□□□ 0.73
Foxd4Q60688 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Foxd4Q60688 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Foxd4Q60688 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Foxd4Q60688 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Foxd4Q60688 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Foxd4Q60688 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Foxd4Q60688 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Foxd4Q60688 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.61■□□□□ 0.73
Foxd4Q60688 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Foxd4Q60688 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Foxd4Q60688 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Foxd4Q60688 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Foxd4Q60688 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Foxd4Q60688 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Foxd4Q60688 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Foxd4Q60688 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Foxd4Q60688 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Foxd4Q60688 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Foxd4Q60688 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Foxd4Q60688 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Foxd4Q60688 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxd4Q60688 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxd4Q60688 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Foxd4Q60688 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxd4Q60688 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxd4Q60688 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Foxd4Q60688 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Foxd4Q60688 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxd4Q60688 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.6■□□□□ 0.73
Foxd4Q60688 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
Foxd4Q60688 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxd4Q60688 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxd4Q60688 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxd4Q60688 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Foxd4Q60688 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms