Protein–RNA interactions for Protein: Q5U452

Trp53rka, MCG14616, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trp53rkaQ5U452 Gm7332-201ENSMUST00000118351 454 ntBASIC15.18■□□□□ 0.02
Trp53rkaQ5U452 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.18■□□□□ 0.02
Trp53rkaQ5U452 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trp53rkaQ5U452 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trp53rkaQ5U452 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.18■□□□□ 0.02
Trp53rkaQ5U452 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trp53rkaQ5U452 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trp53rkaQ5U452 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trp53rkaQ5U452 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trp53rkaQ5U452 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trp53rkaQ5U452 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trp53rkaQ5U452 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trp53rkaQ5U452 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trp53rkaQ5U452 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Trp53rkaQ5U452 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trp53rkaQ5U452 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trp53rkaQ5U452 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trp53rkaQ5U452 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trp53rkaQ5U452 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trp53rkaQ5U452 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trp53rkaQ5U452 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trp53rkaQ5U452 Gm14523-201ENSMUST00000117260 558 ntBASIC15.17■□□□□ 0.02
Trp53rkaQ5U452 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trp53rkaQ5U452 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.17■□□□□ 0.02
Trp53rkaQ5U452 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.17■□□□□ 0.02
Trp53rkaQ5U452 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trp53rkaQ5U452 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.16■□□□□ 0.02
Trp53rkaQ5U452 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trp53rkaQ5U452 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trp53rkaQ5U452 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trp53rkaQ5U452 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trp53rkaQ5U452 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.16■□□□□ 0.02
Trp53rkaQ5U452 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trp53rkaQ5U452 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trp53rkaQ5U452 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trp53rkaQ5U452 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trp53rkaQ5U452 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trp53rkaQ5U452 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trp53rkaQ5U452 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trp53rkaQ5U452 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trp53rkaQ5U452 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trp53rkaQ5U452 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trp53rkaQ5U452 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trp53rkaQ5U452 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trp53rkaQ5U452 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trp53rkaQ5U452 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trp53rkaQ5U452 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.15■□□□□ 0.02
Trp53rkaQ5U452 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trp53rkaQ5U452 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.15■□□□□ 0.02
Trp53rkaQ5U452 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trp53rkaQ5U452 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trp53rkaQ5U452 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trp53rkaQ5U452 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trp53rkaQ5U452 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trp53rkaQ5U452 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trp53rkaQ5U452 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trp53rkaQ5U452 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trp53rkaQ5U452 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trp53rkaQ5U452 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trp53rkaQ5U452 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.14■□□□□ 0.01
Trp53rkaQ5U452 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trp53rkaQ5U452 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trp53rkaQ5U452 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trp53rkaQ5U452 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC15.14■□□□□ 0.01
Trp53rkaQ5U452 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC15.14■□□□□ 0.01
Trp53rkaQ5U452 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trp53rkaQ5U452 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Trp53rkaQ5U452 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trp53rkaQ5U452 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
Trp53rkaQ5U452 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trp53rkaQ5U452 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.14■□□□□ 0.01
Trp53rkaQ5U452 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trp53rkaQ5U452 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trp53rkaQ5U452 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trp53rkaQ5U452 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trp53rkaQ5U452 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trp53rkaQ5U452 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trp53rkaQ5U452 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.13■□□□□ 0.01
Trp53rkaQ5U452 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.13■□□□□ 0.01
Trp53rkaQ5U452 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trp53rkaQ5U452 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trp53rkaQ5U452 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trp53rkaQ5U452 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trp53rkaQ5U452 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.13■□□□□ 0.01
Trp53rkaQ5U452 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trp53rkaQ5U452 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trp53rkaQ5U452 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trp53rkaQ5U452 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trp53rkaQ5U452 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.12■□□□□ 0.01
Trp53rkaQ5U452 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trp53rkaQ5U452 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trp53rkaQ5U452 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trp53rkaQ5U452 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trp53rkaQ5U452 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trp53rkaQ5U452 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trp53rkaQ5U452 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC15.12■□□□□ 0.01
Trp53rkaQ5U452 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trp53rkaQ5U452 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.12■□□□□ 0.01
Trp53rkaQ5U452 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trp53rkaQ5U452 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms