Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim38Q5SZ99 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trim38Q5SZ99 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim38Q5SZ99 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.97■□□□□ 0.79
Trim38Q5SZ99 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim38Q5SZ99 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.97■□□□□ 0.79
Trim38Q5SZ99 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim38Q5SZ99 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.97■□□□□ 0.79
Trim38Q5SZ99 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim38Q5SZ99 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.97■□□□□ 0.79
Trim38Q5SZ99 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.97■□□□□ 0.79
Trim38Q5SZ99 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.97■□□□□ 0.79
Trim38Q5SZ99 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim38Q5SZ99 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim38Q5SZ99 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim38Q5SZ99 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim38Q5SZ99 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim38Q5SZ99 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim38Q5SZ99 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.96■□□□□ 0.79
Trim38Q5SZ99 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.96■□□□□ 0.79
Trim38Q5SZ99 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim38Q5SZ99 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim38Q5SZ99 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim38Q5SZ99 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim38Q5SZ99 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.95■□□□□ 0.78
Trim38Q5SZ99 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim38Q5SZ99 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.95■□□□□ 0.78
Trim38Q5SZ99 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim38Q5SZ99 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
Trim38Q5SZ99 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim38Q5SZ99 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim38Q5SZ99 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Trim38Q5SZ99 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim38Q5SZ99 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Trim38Q5SZ99 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim38Q5SZ99 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim38Q5SZ99 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim38Q5SZ99 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim38Q5SZ99 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim38Q5SZ99 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim38Q5SZ99 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.94■□□□□ 0.78
Trim38Q5SZ99 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.94■□□□□ 0.78
Trim38Q5SZ99 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.94■□□□□ 0.78
Trim38Q5SZ99 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim38Q5SZ99 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim38Q5SZ99 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trim38Q5SZ99 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim38Q5SZ99 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim38Q5SZ99 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Trim38Q5SZ99 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Trim38Q5SZ99 Gm27454-201ENSMUST00000185090 204 ntBASIC19.93■□□□□ 0.78
Trim38Q5SZ99 Gm8493-201ENSMUST00000196881 489 ntBASIC19.93■□□□□ 0.78
Trim38Q5SZ99 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Trim38Q5SZ99 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim38Q5SZ99 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Trim38Q5SZ99 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim38Q5SZ99 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim38Q5SZ99 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim38Q5SZ99 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim38Q5SZ99 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim38Q5SZ99 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim38Q5SZ99 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim38Q5SZ99 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.92■□□□□ 0.78
Trim38Q5SZ99 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim38Q5SZ99 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim38Q5SZ99 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim38Q5SZ99 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim38Q5SZ99 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim38Q5SZ99 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim38Q5SZ99 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim38Q5SZ99 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim38Q5SZ99 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim38Q5SZ99 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Trim38Q5SZ99 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Trim38Q5SZ99 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim38Q5SZ99 Smad6-203ENSMUST00000179458 273 ntBASIC19.91■□□□□ 0.78
Trim38Q5SZ99 Gm43173-201ENSMUST00000202246 593 ntBASIC19.91■□□□□ 0.78
Trim38Q5SZ99 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim38Q5SZ99 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.91■□□□□ 0.78
Trim38Q5SZ99 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Trim38Q5SZ99 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim38Q5SZ99 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim38Q5SZ99 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim38Q5SZ99 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Trim38Q5SZ99 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Trim38Q5SZ99 Gm11421-201ENSMUST00000122124 294 ntBASIC19.9■□□□□ 0.78
Trim38Q5SZ99 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.9■□□□□ 0.78
Trim38Q5SZ99 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim38Q5SZ99 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim38Q5SZ99 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Trim38Q5SZ99 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim38Q5SZ99 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim38Q5SZ99 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim38Q5SZ99 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim38Q5SZ99 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim38Q5SZ99 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.89■□□□□ 0.77
Trim38Q5SZ99 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim38Q5SZ99 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim38Q5SZ99 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Trim38Q5SZ99 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms