Protein–RNA interactions for Protein: Q5SUQ9

Ctc1, CST complex subunit CTC1, mousemouse

Predictions only

Length 1,212 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1Q5SUQ9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ctc1Q5SUQ9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ctc1Q5SUQ9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.47■□□□□ 0.87
Ctc1Q5SUQ9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ctc1Q5SUQ9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctc1Q5SUQ9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ctc1Q5SUQ9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctc1Q5SUQ9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctc1Q5SUQ9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.46■□□□□ 0.87
Ctc1Q5SUQ9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctc1Q5SUQ9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ctc1Q5SUQ9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctc1Q5SUQ9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctc1Q5SUQ9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ctc1Q5SUQ9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ctc1Q5SUQ9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ctc1Q5SUQ9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Ctc1Q5SUQ9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ctc1Q5SUQ9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ctc1Q5SUQ9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ctc1Q5SUQ9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ctc1Q5SUQ9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Ctc1Q5SUQ9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ctc1Q5SUQ9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ctc1Q5SUQ9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Ctc1Q5SUQ9 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Ctc1Q5SUQ9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ctc1Q5SUQ9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ctc1Q5SUQ9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ctc1Q5SUQ9 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ctc1Q5SUQ9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.44■□□□□ 0.86
Ctc1Q5SUQ9 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ctc1Q5SUQ9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Ctc1Q5SUQ9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ctc1Q5SUQ9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctc1Q5SUQ9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctc1Q5SUQ9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctc1Q5SUQ9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctc1Q5SUQ9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctc1Q5SUQ9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ctc1Q5SUQ9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctc1Q5SUQ9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctc1Q5SUQ9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ctc1Q5SUQ9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.43■□□□□ 0.86
Ctc1Q5SUQ9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ctc1Q5SUQ9 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctc1Q5SUQ9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Ctc1Q5SUQ9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ctc1Q5SUQ9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ctc1Q5SUQ9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctc1Q5SUQ9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.42■□□□□ 0.86
Ctc1Q5SUQ9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Ctc1Q5SUQ9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctc1Q5SUQ9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctc1Q5SUQ9 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctc1Q5SUQ9 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.42■□□□□ 0.86
Ctc1Q5SUQ9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ctc1Q5SUQ9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctc1Q5SUQ9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ctc1Q5SUQ9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctc1Q5SUQ9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctc1Q5SUQ9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ctc1Q5SUQ9 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.41■□□□□ 0.86
Ctc1Q5SUQ9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ctc1Q5SUQ9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctc1Q5SUQ9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctc1Q5SUQ9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctc1Q5SUQ9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ctc1Q5SUQ9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctc1Q5SUQ9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.4■□□□□ 0.86
Ctc1Q5SUQ9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctc1Q5SUQ9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctc1Q5SUQ9 Gm40848-201ENSMUST00000221998 324 ntBASIC20.4■□□□□ 0.86
Ctc1Q5SUQ9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ctc1Q5SUQ9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctc1Q5SUQ9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ctc1Q5SUQ9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ctc1Q5SUQ9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ctc1Q5SUQ9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Ctc1Q5SUQ9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ctc1Q5SUQ9 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.86
Ctc1Q5SUQ9 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Ctc1Q5SUQ9 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.39■□□□□ 0.86
Ctc1Q5SUQ9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Ctc1Q5SUQ9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctc1Q5SUQ9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ctc1Q5SUQ9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.39■□□□□ 0.85
Ctc1Q5SUQ9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Ctc1Q5SUQ9 Smad6-203ENSMUST00000179458 273 ntBASIC20.39■□□□□ 0.85
Ctc1Q5SUQ9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ctc1Q5SUQ9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ctc1Q5SUQ9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Ctc1Q5SUQ9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Ctc1Q5SUQ9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Ctc1Q5SUQ9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Ctc1Q5SUQ9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctc1Q5SUQ9 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctc1Q5SUQ9 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ctc1Q5SUQ9 Gm37179-201ENSMUST00000194862 823 ntBASIC20.38■□□□□ 0.85
Ctc1Q5SUQ9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms