Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8d-1Q5R1H8 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8d-1Q5R1H8 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8d-1Q5R1H8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8d-1Q5R1H8 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8d-1Q5R1H8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8d-1Q5R1H8 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8d-1Q5R1H8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav8d-1Q5R1H8 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav8d-1Q5R1H8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav8d-1Q5R1H8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav8d-1Q5R1H8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav8d-1Q5R1H8 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-1Q5R1H8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-1Q5R1H8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-1Q5R1H8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-1Q5R1H8 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-1Q5R1H8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-1Q5R1H8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-1Q5R1H8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav8d-1Q5R1H8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trav8d-1Q5R1H8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-1Q5R1H8 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav8d-1Q5R1H8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-1Q5R1H8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-1Q5R1H8 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-1Q5R1H8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-1Q5R1H8 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav8d-1Q5R1H8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-1Q5R1H8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-1Q5R1H8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav8d-1Q5R1H8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trav8d-1Q5R1H8 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-1Q5R1H8 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-1Q5R1H8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-1Q5R1H8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-1Q5R1H8 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav8d-1Q5R1H8 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-1Q5R1H8 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-1Q5R1H8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav8d-1Q5R1H8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav8d-1Q5R1H8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-1Q5R1H8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-1Q5R1H8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav8d-1Q5R1H8 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC15.68■□□□□ 0.1
Trav8d-1Q5R1H8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC15.68■□□□□ 0.1
Trav8d-1Q5R1H8 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav8d-1Q5R1H8 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-1Q5R1H8 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-1Q5R1H8 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav8d-1Q5R1H8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav8d-1Q5R1H8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav8d-1Q5R1H8 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-1Q5R1H8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-1Q5R1H8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav8d-1Q5R1H8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms