Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC34.37■■■■□ 3.09
Pds5bQ4VA53 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC34.37■■■■□ 3.09
Pds5bQ4VA53 AC175538.1-201ENSMUST00000225343 1269 ntBASIC34.37■■■■□ 3.09
Pds5bQ4VA53 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Pds5bQ4VA53 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
Pds5bQ4VA53 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
Pds5bQ4VA53 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Pds5bQ4VA53 Gm13158-201ENSMUST00000122007 736 ntBASIC34.36■■■■□ 3.09
Pds5bQ4VA53 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC34.36■■■■□ 3.09
Pds5bQ4VA53 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
Pds5bQ4VA53 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC34.35■■■■□ 3.09
Pds5bQ4VA53 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
Pds5bQ4VA53 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC34.35■■■■□ 3.09
Pds5bQ4VA53 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Pds5bQ4VA53 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC34.35■■■■□ 3.09
Pds5bQ4VA53 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC34.35■■■■□ 3.09
Pds5bQ4VA53 Gm5417-201ENSMUST00000079706 384 ntBASIC34.35■■■■□ 3.09
Pds5bQ4VA53 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC34.35■■■■□ 3.09
Pds5bQ4VA53 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
Pds5bQ4VA53 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC34.34■■■■□ 3.09
Pds5bQ4VA53 AC163280.1-201ENSMUST00000228194 1100 ntBASIC34.34■■■■□ 3.09
Pds5bQ4VA53 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC34.34■■■■□ 3.09
Pds5bQ4VA53 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC34.34■■■■□ 3.09
Pds5bQ4VA53 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC34.34■■■■□ 3.09
Pds5bQ4VA53 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Pds5bQ4VA53 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC34.33■■■■□ 3.09
Pds5bQ4VA53 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC34.33■■■■□ 3.09
Pds5bQ4VA53 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Pds5bQ4VA53 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC34.33■■■■□ 3.09
Pds5bQ4VA53 Gm7367-201ENSMUST00000057611 492 ntBASIC34.33■■■■□ 3.09
Pds5bQ4VA53 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Pds5bQ4VA53 Gm37415-201ENSMUST00000192265 2054 ntBASIC34.32■■■■□ 3.09
Pds5bQ4VA53 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC34.32■■■■□ 3.08
Pds5bQ4VA53 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Pds5bQ4VA53 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC34.32■■■■□ 3.08
Pds5bQ4VA53 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC34.31■■■■□ 3.08
Pds5bQ4VA53 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC34.31■■■■□ 3.08
Pds5bQ4VA53 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
Pds5bQ4VA53 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC34.31■■■■□ 3.08
Pds5bQ4VA53 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Pds5bQ4VA53 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
Pds5bQ4VA53 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC34.3■■■■□ 3.08
Pds5bQ4VA53 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
Pds5bQ4VA53 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Pds5bQ4VA53 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
Pds5bQ4VA53 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
Pds5bQ4VA53 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC34.29■■■■□ 3.08
Pds5bQ4VA53 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Pds5bQ4VA53 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC34.29■■■■□ 3.08
Pds5bQ4VA53 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Pds5bQ4VA53 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
Pds5bQ4VA53 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC34.28■■■■□ 3.08
Pds5bQ4VA53 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC34.28■■■■□ 3.08
Pds5bQ4VA53 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Pds5bQ4VA53 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC34.27■■■■□ 3.08
Pds5bQ4VA53 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Pds5bQ4VA53 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC34.27■■■■□ 3.08
Pds5bQ4VA53 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Pds5bQ4VA53 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Pds5bQ4VA53 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
Pds5bQ4VA53 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
Pds5bQ4VA53 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC34.26■■■■□ 3.07
Pds5bQ4VA53 Gm10517-202ENSMUST00000192970 758 ntBASIC34.26■■■■□ 3.07
Pds5bQ4VA53 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC34.26■■■■□ 3.07
Pds5bQ4VA53 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC34.26■■■■□ 3.07
Pds5bQ4VA53 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.07
Pds5bQ4VA53 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC34.26■■■■□ 3.07
Pds5bQ4VA53 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Pds5bQ4VA53 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC34.25■■■■□ 3.07
Pds5bQ4VA53 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
Pds5bQ4VA53 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
Pds5bQ4VA53 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC34.25■■■■□ 3.07
Pds5bQ4VA53 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC34.24■■■■□ 3.07
Pds5bQ4VA53 Gm6659-201ENSMUST00000174752 547 ntBASIC34.24■■■■□ 3.07
Pds5bQ4VA53 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC34.24■■■■□ 3.07
Pds5bQ4VA53 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Pds5bQ4VA53 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Pds5bQ4VA53 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC34.22■■■■□ 3.07
Pds5bQ4VA53 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
Pds5bQ4VA53 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Pds5bQ4VA53 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC34.22■■■■□ 3.07
Pds5bQ4VA53 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC34.22■■■■□ 3.07
Pds5bQ4VA53 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Pds5bQ4VA53 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
Pds5bQ4VA53 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Pds5bQ4VA53 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
Pds5bQ4VA53 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC34.21■■■■□ 3.07
Pds5bQ4VA53 Gm21814-202ENSMUST00000203277 873 ntBASIC34.21■■■■□ 3.07
Pds5bQ4VA53 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC34.21■■■■□ 3.07
Pds5bQ4VA53 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC34.21■■■■□ 3.07
Pds5bQ4VA53 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC34.2■■■■□ 3.07
Pds5bQ4VA53 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
Pds5bQ4VA53 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC34.2■■■■□ 3.07
Pds5bQ4VA53 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC34.2■■■■□ 3.07
Pds5bQ4VA53 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
Pds5bQ4VA53 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC34.2■■■■□ 3.06
Pds5bQ4VA53 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.06
Pds5bQ4VA53 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Pds5bQ4VA53 Gm43909-201ENSMUST00000203443 1876 ntBASIC34.19■■■■□ 3.06
Pds5bQ4VA53 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms