Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam196aQ3USH1 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.48■□□□□ 0.71
Fam196aQ3USH1 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam196aQ3USH1 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam196aQ3USH1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam196aQ3USH1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Fam196aQ3USH1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Fam196aQ3USH1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam196aQ3USH1 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Fam196aQ3USH1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Fam196aQ3USH1 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam196aQ3USH1 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fam196aQ3USH1 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.47■□□□□ 0.71
Fam196aQ3USH1 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fam196aQ3USH1 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fam196aQ3USH1 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fam196aQ3USH1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fam196aQ3USH1 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.47■□□□□ 0.71
Fam196aQ3USH1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fam196aQ3USH1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fam196aQ3USH1 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.47■□□□□ 0.71
Fam196aQ3USH1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Fam196aQ3USH1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.47■□□□□ 0.71
Fam196aQ3USH1 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fam196aQ3USH1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fam196aQ3USH1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Fam196aQ3USH1 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Fam196aQ3USH1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Fam196aQ3USH1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Fam196aQ3USH1 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fam196aQ3USH1 Gm15378-201ENSMUST00000121894 207 ntBASIC19.46■□□□□ 0.71
Fam196aQ3USH1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.46■□□□□ 0.71
Fam196aQ3USH1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fam196aQ3USH1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fam196aQ3USH1 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Fam196aQ3USH1 Gm10819-201ENSMUST00000099988 561 ntBASIC19.46■□□□□ 0.71
Fam196aQ3USH1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Fam196aQ3USH1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.46■□□□□ 0.71
Fam196aQ3USH1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.46■□□□□ 0.71
Fam196aQ3USH1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fam196aQ3USH1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fam196aQ3USH1 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fam196aQ3USH1 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fam196aQ3USH1 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fam196aQ3USH1 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fam196aQ3USH1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Fam196aQ3USH1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.45■□□□□ 0.7
Fam196aQ3USH1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fam196aQ3USH1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fam196aQ3USH1 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Fam196aQ3USH1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Fam196aQ3USH1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fam196aQ3USH1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fam196aQ3USH1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
Fam196aQ3USH1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fam196aQ3USH1 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fam196aQ3USH1 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.45■□□□□ 0.7
Fam196aQ3USH1 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Fam196aQ3USH1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Fam196aQ3USH1 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.45■□□□□ 0.7
Fam196aQ3USH1 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fam196aQ3USH1 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Fam196aQ3USH1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fam196aQ3USH1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Fam196aQ3USH1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fam196aQ3USH1 Gm21362-201ENSMUST00000194272 928 ntBASIC19.44■□□□□ 0.7
Fam196aQ3USH1 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.44■□□□□ 0.7
Fam196aQ3USH1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
Fam196aQ3USH1 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fam196aQ3USH1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Fam196aQ3USH1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Fam196aQ3USH1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Fam196aQ3USH1 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Gm11249-201ENSMUST00000117071 859 ntBASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Gm20472-201ENSMUST00000174403 1240 ntBASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Gm10231-201ENSMUST00000181584 441 ntBASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Gm10175-202ENSMUST00000208752 441 ntBASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fam196aQ3USH1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fam196aQ3USH1 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fam196aQ3USH1 Notumos-201ENSMUST00000151998 2659 ntBASIC19.42■□□□□ 0.7
Fam196aQ3USH1 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fam196aQ3USH1 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Fam196aQ3USH1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Fam196aQ3USH1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Fam196aQ3USH1 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms