Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smcr8Q3UMB5 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smcr8Q3UMB5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smcr8Q3UMB5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smcr8Q3UMB5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smcr8Q3UMB5 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
Smcr8Q3UMB5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smcr8Q3UMB5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smcr8Q3UMB5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smcr8Q3UMB5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Smcr8Q3UMB5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smcr8Q3UMB5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smcr8Q3UMB5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smcr8Q3UMB5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smcr8Q3UMB5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Smcr8Q3UMB5 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smcr8Q3UMB5 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.72■□□□□ 0.91
Smcr8Q3UMB5 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smcr8Q3UMB5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smcr8Q3UMB5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smcr8Q3UMB5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Smcr8Q3UMB5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smcr8Q3UMB5 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smcr8Q3UMB5 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smcr8Q3UMB5 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.71■□□□□ 0.91
Smcr8Q3UMB5 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.71■□□□□ 0.91
Smcr8Q3UMB5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smcr8Q3UMB5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smcr8Q3UMB5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.7■□□□□ 0.9
Smcr8Q3UMB5 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smcr8Q3UMB5 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.7■□□□□ 0.9
Smcr8Q3UMB5 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Smcr8Q3UMB5 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smcr8Q3UMB5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Smcr8Q3UMB5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.7■□□□□ 0.9
Smcr8Q3UMB5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smcr8Q3UMB5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smcr8Q3UMB5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.7■□□□□ 0.9
Smcr8Q3UMB5 AA386476-201ENSMUST00000098781 1665 ntBASIC20.7■□□□□ 0.9
Smcr8Q3UMB5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Smcr8Q3UMB5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Smcr8Q3UMB5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smcr8Q3UMB5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smcr8Q3UMB5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smcr8Q3UMB5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smcr8Q3UMB5 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smcr8Q3UMB5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smcr8Q3UMB5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smcr8Q3UMB5 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.69■□□□□ 0.9
Smcr8Q3UMB5 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Smcr8Q3UMB5 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.69■□□□□ 0.9
Smcr8Q3UMB5 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smcr8Q3UMB5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Smcr8Q3UMB5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.69■□□□□ 0.9
Smcr8Q3UMB5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smcr8Q3UMB5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Smcr8Q3UMB5 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Smcr8Q3UMB5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC20.68■□□□□ 0.9
Smcr8Q3UMB5 Gm7514-201ENSMUST00000209475 934 ntBASIC20.68■□□□□ 0.9
Smcr8Q3UMB5 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smcr8Q3UMB5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Smcr8Q3UMB5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smcr8Q3UMB5 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.68■□□□□ 0.9
Smcr8Q3UMB5 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Smcr8Q3UMB5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smcr8Q3UMB5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.67■□□□□ 0.9
Smcr8Q3UMB5 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.67■□□□□ 0.9
Smcr8Q3UMB5 Gm10602-201ENSMUST00000098239 609 ntBASIC20.67■□□□□ 0.9
Smcr8Q3UMB5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smcr8Q3UMB5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smcr8Q3UMB5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Smcr8Q3UMB5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smcr8Q3UMB5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smcr8Q3UMB5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.66■□□□□ 0.9
Smcr8Q3UMB5 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smcr8Q3UMB5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Smcr8Q3UMB5 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smcr8Q3UMB5 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smcr8Q3UMB5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smcr8Q3UMB5 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
Smcr8Q3UMB5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Smcr8Q3UMB5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smcr8Q3UMB5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Smcr8Q3UMB5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.65■□□□□ 0.9
Smcr8Q3UMB5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smcr8Q3UMB5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Smcr8Q3UMB5 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Smcr8Q3UMB5 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.65■□□□□ 0.9
Smcr8Q3UMB5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smcr8Q3UMB5 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smcr8Q3UMB5 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smcr8Q3UMB5 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smcr8Q3UMB5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Smcr8Q3UMB5 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.65■□□□□ 0.9
Smcr8Q3UMB5 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smcr8Q3UMB5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smcr8Q3UMB5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smcr8Q3UMB5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Smcr8Q3UMB5 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Smcr8Q3UMB5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms