Protein–RNA interactions for Protein: Q3UD01

Atxn7l3b, Ataxin-7-like protein 3B, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn7l3bQ3UD01 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atxn7l3bQ3UD01 AA386476-201ENSMUST00000098781 1665 ntBASIC19.44■□□□□ 0.7
Atxn7l3bQ3UD01 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atxn7l3bQ3UD01 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atxn7l3bQ3UD01 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.44■□□□□ 0.7
Atxn7l3bQ3UD01 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atxn7l3bQ3UD01 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atxn7l3bQ3UD01 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Atxn7l3bQ3UD01 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Atxn7l3bQ3UD01 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Atxn7l3bQ3UD01 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atxn7l3bQ3UD01 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atxn7l3bQ3UD01 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atxn7l3bQ3UD01 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atxn7l3bQ3UD01 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atxn7l3bQ3UD01 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atxn7l3bQ3UD01 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Atxn7l3bQ3UD01 Appbp2os-202ENSMUST00000206972 447 ntBASIC19.43■□□□□ 0.7
Atxn7l3bQ3UD01 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atxn7l3bQ3UD01 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Atxn7l3bQ3UD01 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Atxn7l3bQ3UD01 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Atxn7l3bQ3UD01 Golph3-205ENSMUST00000228671 2842 ntBASIC19.43■□□□□ 0.7
Atxn7l3bQ3UD01 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atxn7l3bQ3UD01 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atxn7l3bQ3UD01 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atxn7l3bQ3UD01 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atxn7l3bQ3UD01 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atxn7l3bQ3UD01 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.42■□□□□ 0.7
Atxn7l3bQ3UD01 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atxn7l3bQ3UD01 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Atxn7l3bQ3UD01 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.42■□□□□ 0.7
Atxn7l3bQ3UD01 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Atxn7l3bQ3UD01 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn7l3bQ3UD01 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn7l3bQ3UD01 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn7l3bQ3UD01 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn7l3bQ3UD01 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.41■□□□□ 0.7
Atxn7l3bQ3UD01 Golgb1-201ENSMUST00000023534 498 ntBASIC19.41■□□□□ 0.7
Atxn7l3bQ3UD01 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn7l3bQ3UD01 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn7l3bQ3UD01 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn7l3bQ3UD01 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn7l3bQ3UD01 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn7l3bQ3UD01 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn7l3bQ3UD01 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Atxn7l3bQ3UD01 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.41■□□□□ 0.7
Atxn7l3bQ3UD01 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Atxn7l3bQ3UD01 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn7l3bQ3UD01 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.4■□□□□ 0.7
Atxn7l3bQ3UD01 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.4■□□□□ 0.7
Atxn7l3bQ3UD01 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn7l3bQ3UD01 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn7l3bQ3UD01 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.4■□□□□ 0.7
Atxn7l3bQ3UD01 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn7l3bQ3UD01 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn7l3bQ3UD01 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Atxn7l3bQ3UD01 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Atxn7l3bQ3UD01 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.39■□□□□ 0.69
Atxn7l3bQ3UD01 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn7l3bQ3UD01 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Atxn7l3bQ3UD01 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn7l3bQ3UD01 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn7l3bQ3UD01 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn7l3bQ3UD01 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn7l3bQ3UD01 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Atxn7l3bQ3UD01 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Atxn7l3bQ3UD01 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn7l3bQ3UD01 Gm12821-201ENSMUST00000120022 600 ntBASIC19.38■□□□□ 0.69
Atxn7l3bQ3UD01 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn7l3bQ3UD01 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn7l3bQ3UD01 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.38■□□□□ 0.69
Atxn7l3bQ3UD01 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn7l3bQ3UD01 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Atxn7l3bQ3UD01 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn7l3bQ3UD01 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Atxn7l3bQ3UD01 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.38■□□□□ 0.69
Atxn7l3bQ3UD01 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Atxn7l3bQ3UD01 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atxn7l3bQ3UD01 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.37■□□□□ 0.69
Atxn7l3bQ3UD01 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atxn7l3bQ3UD01 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atxn7l3bQ3UD01 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Atxn7l3bQ3UD01 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atxn7l3bQ3UD01 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Atxn7l3bQ3UD01 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atxn7l3bQ3UD01 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.36■□□□□ 0.69
Atxn7l3bQ3UD01 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atxn7l3bQ3UD01 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Atxn7l3bQ3UD01 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atxn7l3bQ3UD01 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Atxn7l3bQ3UD01 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atxn7l3bQ3UD01 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atxn7l3bQ3UD01 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Atxn7l3bQ3UD01 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Atxn7l3bQ3UD01 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atxn7l3bQ3UD01 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.35■□□□□ 0.69
Atxn7l3bQ3UD01 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atxn7l3bQ3UD01 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Atxn7l3bQ3UD01 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms