Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 AC153881.1-201ENSMUST00000214448 284 ntBASIC23.19■■□□□ 1.3
Col5a2Q3U962 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col5a2Q3U962 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
Col5a2Q3U962 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col5a2Q3U962 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC23.19■■□□□ 1.3
Col5a2Q3U962 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col5a2Q3U962 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col5a2Q3U962 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Col5a2Q3U962 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC23.18■■□□□ 1.3
Col5a2Q3U962 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC23.18■■□□□ 1.3
Col5a2Q3U962 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Col5a2Q3U962 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col5a2Q3U962 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC23.17■■□□□ 1.3
Col5a2Q3U962 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Col5a2Q3U962 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Col5a2Q3U962 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Col5a2Q3U962 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Col5a2Q3U962 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Col5a2Q3U962 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Col5a2Q3U962 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Col5a2Q3U962 Gm37055-201ENSMUST00000191866 133 ntBASIC23.17■■□□□ 1.3
Col5a2Q3U962 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Col5a2Q3U962 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col5a2Q3U962 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col5a2Q3U962 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.16■■□□□ 1.3
Col5a2Q3U962 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC23.16■■□□□ 1.3
Col5a2Q3U962 Gm2559-201ENSMUST00000201323 363 ntBASIC23.16■■□□□ 1.3
Col5a2Q3U962 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col5a2Q3U962 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col5a2Q3U962 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Col5a2Q3U962 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Col5a2Q3U962 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Col5a2Q3U962 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Col5a2Q3U962 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Col5a2Q3U962 Gm12504-201ENSMUST00000120860 2231 ntBASIC23.14■■□□□ 1.3
Col5a2Q3U962 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Col5a2Q3U962 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Col5a2Q3U962 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Col5a2Q3U962 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Col5a2Q3U962 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Col5a2Q3U962 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Col5a2Q3U962 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC23.14■■□□□ 1.29
Col5a2Q3U962 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Col5a2Q3U962 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Col5a2Q3U962 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Col5a2Q3U962 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Col5a2Q3U962 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Col5a2Q3U962 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Col5a2Q3U962 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Col5a2Q3U962 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col5a2Q3U962 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Col5a2Q3U962 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Col5a2Q3U962 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Col5a2Q3U962 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC23.13■■□□□ 1.29
Col5a2Q3U962 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col5a2Q3U962 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC23.13■■□□□ 1.29
Col5a2Q3U962 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC23.13■■□□□ 1.29
Col5a2Q3U962 AC154649.1-201ENSMUST00000227392 384 ntBASIC23.13■■□□□ 1.29
Col5a2Q3U962 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col5a2Q3U962 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
Col5a2Q3U962 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
Col5a2Q3U962 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC23.13■■□□□ 1.29
Col5a2Q3U962 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Col5a2Q3U962 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.13■■□□□ 1.29
Col5a2Q3U962 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col5a2Q3U962 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Col5a2Q3U962 Gm43909-201ENSMUST00000203443 1876 ntBASIC23.12■■□□□ 1.29
Col5a2Q3U962 Gm21596-201ENSMUST00000178049 1316 ntBASIC23.12■■□□□ 1.29
Col5a2Q3U962 Gm11249-201ENSMUST00000117071 859 ntBASIC23.12■■□□□ 1.29
Col5a2Q3U962 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col5a2Q3U962 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col5a2Q3U962 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Col5a2Q3U962 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col5a2Q3U962 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col5a2Q3U962 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Col5a2Q3U962 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col5a2Q3U962 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col5a2Q3U962 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col5a2Q3U962 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col5a2Q3U962 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Col5a2Q3U962 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Col5a2Q3U962 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Col5a2Q3U962 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col5a2Q3U962 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
Col5a2Q3U962 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col5a2Q3U962 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col5a2Q3U962 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.1■■□□□ 1.29
Col5a2Q3U962 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col5a2Q3U962 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col5a2Q3U962 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col5a2Q3U962 Mir1199-201ENSMUST00000117015 119 ntBASIC23.1■■□□□ 1.29
Col5a2Q3U962 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Col5a2Q3U962 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col5a2Q3U962 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col5a2Q3U962 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Col5a2Q3U962 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Col5a2Q3U962 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col5a2Q3U962 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC23.09■■□□□ 1.29
Col5a2Q3U962 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC23.09■■□□□ 1.29
Col5a2Q3U962 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms