Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC23.13■■□□□ 1.29
Rnf180Q3U827 AA414768-201ENSMUST00000121924 1257 ntBASIC23.13■■□□□ 1.29
Rnf180Q3U827 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Rnf180Q3U827 Gm7889-201ENSMUST00000185591 958 ntBASIC23.13■■□□□ 1.29
Rnf180Q3U827 AC130713.1-201ENSMUST00000228853 1096 ntBASIC23.13■■□□□ 1.29
Rnf180Q3U827 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf180Q3U827 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf180Q3U827 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf180Q3U827 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC23.13■■□□□ 1.29
Rnf180Q3U827 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf180Q3U827 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf180Q3U827 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf180Q3U827 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC23.12■■□□□ 1.29
Rnf180Q3U827 Gm11539-201ENSMUST00000119837 557 ntBASIC23.12■■□□□ 1.29
Rnf180Q3U827 Gm13436-201ENSMUST00000120418 567 ntBASIC23.12■■□□□ 1.29
Rnf180Q3U827 Gm15847-201ENSMUST00000121417 1065 ntBASIC23.12■■□□□ 1.29
Rnf180Q3U827 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC23.12■■□□□ 1.29
Rnf180Q3U827 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf180Q3U827 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf180Q3U827 AC163280.1-201ENSMUST00000228194 1100 ntBASIC23.12■■□□□ 1.29
Rnf180Q3U827 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf180Q3U827 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Rnf180Q3U827 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf180Q3U827 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf180Q3U827 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf180Q3U827 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC23.12■■□□□ 1.29
Rnf180Q3U827 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf180Q3U827 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf180Q3U827 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC23.11■■□□□ 1.29
Rnf180Q3U827 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC23.11■■□□□ 1.29
Rnf180Q3U827 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC23.11■■□□□ 1.29
Rnf180Q3U827 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf180Q3U827 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf180Q3U827 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC23.11■■□□□ 1.29
Rnf180Q3U827 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf180Q3U827 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Rnf180Q3U827 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf180Q3U827 Gm10013-201ENSMUST00000106074 672 ntBASIC23.1■■□□□ 1.29
Rnf180Q3U827 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf180Q3U827 Gm44771-201ENSMUST00000206975 626 ntBASIC23.1■■□□□ 1.29
Rnf180Q3U827 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC23.1■■□□□ 1.29
Rnf180Q3U827 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf180Q3U827 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf180Q3U827 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf180Q3U827 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf180Q3U827 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
Rnf180Q3U827 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
Rnf180Q3U827 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf180Q3U827 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf180Q3U827 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC23.09■■□□□ 1.29
Rnf180Q3U827 Arhgef4-208ENSMUST00000211073 171 ntBASIC23.09■■□□□ 1.29
Rnf180Q3U827 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC23.09■■□□□ 1.29
Rnf180Q3U827 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Rnf180Q3U827 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rnf180Q3U827 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rnf180Q3U827 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC23.08■■□□□ 1.29
Rnf180Q3U827 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Rnf180Q3U827 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rnf180Q3U827 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rnf180Q3U827 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf180Q3U827 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf180Q3U827 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf180Q3U827 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf180Q3U827 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf180Q3U827 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf180Q3U827 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Rnf180Q3U827 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf180Q3U827 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf180Q3U827 Gm17971-201ENSMUST00000190239 806 ntBASIC23.06■■□□□ 1.28
Rnf180Q3U827 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Rnf180Q3U827 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf180Q3U827 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf180Q3U827 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf180Q3U827 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf180Q3U827 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC23.05■■□□□ 1.28
Rnf180Q3U827 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf180Q3U827 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf180Q3U827 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf180Q3U827 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Rnf180Q3U827 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf180Q3U827 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf180Q3U827 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf180Q3U827 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.04■■□□□ 1.28
Rnf180Q3U827 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf180Q3U827 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rnf180Q3U827 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rnf180Q3U827 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC23.03■■□□□ 1.28
Rnf180Q3U827 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Rnf180Q3U827 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC23.03■■□□□ 1.28
Rnf180Q3U827 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC23.03■■□□□ 1.28
Rnf180Q3U827 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.02■■□□□ 1.28
Rnf180Q3U827 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf180Q3U827 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf180Q3U827 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf180Q3U827 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf180Q3U827 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC23.01■■□□□ 1.27
Rnf180Q3U827 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
Rnf180Q3U827 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf180Q3U827 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf180Q3U827 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms