Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Shcbp1lQ3TTP0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shcbp1lQ3TTP0 Gm13234-201ENSMUST00000120010 747 ntBASIC19.4■□□□□ 0.7
Shcbp1lQ3TTP0 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shcbp1lQ3TTP0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
Shcbp1lQ3TTP0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shcbp1lQ3TTP0 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.4■□□□□ 0.7
Shcbp1lQ3TTP0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.4■□□□□ 0.7
Shcbp1lQ3TTP0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shcbp1lQ3TTP0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.4■□□□□ 0.7
Shcbp1lQ3TTP0 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.4■□□□□ 0.7
Shcbp1lQ3TTP0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shcbp1lQ3TTP0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Shcbp1lQ3TTP0 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shcbp1lQ3TTP0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.4■□□□□ 0.7
Shcbp1lQ3TTP0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shcbp1lQ3TTP0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shcbp1lQ3TTP0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Shcbp1lQ3TTP0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Shcbp1lQ3TTP0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shcbp1lQ3TTP0 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shcbp1lQ3TTP0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.39■□□□□ 0.69
Shcbp1lQ3TTP0 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.39■□□□□ 0.69
Shcbp1lQ3TTP0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shcbp1lQ3TTP0 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shcbp1lQ3TTP0 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shcbp1lQ3TTP0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.39■□□□□ 0.69
Shcbp1lQ3TTP0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Shcbp1lQ3TTP0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Shcbp1lQ3TTP0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Shcbp1lQ3TTP0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shcbp1lQ3TTP0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shcbp1lQ3TTP0 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shcbp1lQ3TTP0 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Shcbp1lQ3TTP0 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shcbp1lQ3TTP0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Shcbp1lQ3TTP0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shcbp1lQ3TTP0 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shcbp1lQ3TTP0 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Shcbp1lQ3TTP0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shcbp1lQ3TTP0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Shcbp1lQ3TTP0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shcbp1lQ3TTP0 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.37■□□□□ 0.69
Shcbp1lQ3TTP0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.37■□□□□ 0.69
Shcbp1lQ3TTP0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.37■□□□□ 0.69
Shcbp1lQ3TTP0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shcbp1lQ3TTP0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Shcbp1lQ3TTP0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shcbp1lQ3TTP0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shcbp1lQ3TTP0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shcbp1lQ3TTP0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shcbp1lQ3TTP0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shcbp1lQ3TTP0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.36■□□□□ 0.69
Shcbp1lQ3TTP0 Reep4-203ENSMUST00000226563 1444 ntBASIC19.36■□□□□ 0.69
Shcbp1lQ3TTP0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shcbp1lQ3TTP0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.36■□□□□ 0.69
Shcbp1lQ3TTP0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shcbp1lQ3TTP0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Shcbp1lQ3TTP0 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Shcbp1lQ3TTP0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.36■□□□□ 0.69
Shcbp1lQ3TTP0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shcbp1lQ3TTP0 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shcbp1lQ3TTP0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Shcbp1lQ3TTP0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shcbp1lQ3TTP0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shcbp1lQ3TTP0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shcbp1lQ3TTP0 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shcbp1lQ3TTP0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Shcbp1lQ3TTP0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shcbp1lQ3TTP0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shcbp1lQ3TTP0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shcbp1lQ3TTP0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shcbp1lQ3TTP0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shcbp1lQ3TTP0 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Shcbp1lQ3TTP0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Shcbp1lQ3TTP0 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Shcbp1lQ3TTP0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shcbp1lQ3TTP0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shcbp1lQ3TTP0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Shcbp1lQ3TTP0 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.34■□□□□ 0.69
Shcbp1lQ3TTP0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.34■□□□□ 0.69
Shcbp1lQ3TTP0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Shcbp1lQ3TTP0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shcbp1lQ3TTP0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.34■□□□□ 0.69
Shcbp1lQ3TTP0 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Shcbp1lQ3TTP0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.34■□□□□ 0.69
Shcbp1lQ3TTP0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shcbp1lQ3TTP0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Shcbp1lQ3TTP0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.33■□□□□ 0.69
Shcbp1lQ3TTP0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shcbp1lQ3TTP0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shcbp1lQ3TTP0 Gm37179-201ENSMUST00000194862 823 ntBASIC19.33■□□□□ 0.68
Shcbp1lQ3TTP0 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Shcbp1lQ3TTP0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shcbp1lQ3TTP0 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shcbp1lQ3TTP0 Golph3-202ENSMUST00000226517 2359 ntBASIC19.33■□□□□ 0.68
Shcbp1lQ3TTP0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Shcbp1lQ3TTP0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shcbp1lQ3TTP0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shcbp1lQ3TTP0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms