Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cdx4Q07424 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Cdx4Q07424 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cdx4Q07424 Golph3-202ENSMUST00000226517 2359 ntBASIC14.88□□□□□ -0.03
Cdx4Q07424 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cdx4Q07424 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Cdx4Q07424 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cdx4Q07424 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Cdx4Q07424 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Cdx4Q07424 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdx4Q07424 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cdx4Q07424 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.87□□□□□ -0.03
Cdx4Q07424 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.87□□□□□ -0.03
Cdx4Q07424 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.87□□□□□ -0.03
Cdx4Q07424 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdx4Q07424 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdx4Q07424 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cdx4Q07424 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Cdx4Q07424 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdx4Q07424 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdx4Q07424 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cdx4Q07424 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdx4Q07424 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Cdx4Q07424 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdx4Q07424 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cdx4Q07424 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdx4Q07424 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cdx4Q07424 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cdx4Q07424 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx4Q07424 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx4Q07424 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx4Q07424 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx4Q07424 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx4Q07424 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx4Q07424 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx4Q07424 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx4Q07424 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.85□□□□□ -0.03
Cdx4Q07424 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cdx4Q07424 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cdx4Q07424 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx4Q07424 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx4Q07424 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx4Q07424 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Cdx4Q07424 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cdx4Q07424 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx4Q07424 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Cdx4Q07424 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx4Q07424 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx4Q07424 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx4Q07424 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Cdx4Q07424 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cdx4Q07424 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx4Q07424 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.84□□□□□ -0.03
Cdx4Q07424 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx4Q07424 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx4Q07424 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.84□□□□□ -0.03
Cdx4Q07424 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx4Q07424 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
Cdx4Q07424 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx4Q07424 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx4Q07424 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx4Q07424 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx4Q07424 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx4Q07424 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx4Q07424 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx4Q07424 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx4Q07424 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cdx4Q07424 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Cdx4Q07424 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cdx4Q07424 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx4Q07424 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx4Q07424 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx4Q07424 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.83□□□□□ -0.04
Cdx4Q07424 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.83□□□□□ -0.04
Cdx4Q07424 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx4Q07424 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
Cdx4Q07424 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx4Q07424 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx4Q07424 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cdx4Q07424 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Cdx4Q07424 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx4Q07424 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx4Q07424 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Cdx4Q07424 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx4Q07424 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cdx4Q07424 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx4Q07424 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx4Q07424 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx4Q07424 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx4Q07424 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx4Q07424 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx4Q07424 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx4Q07424 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.82□□□□□ -0.04
Cdx4Q07424 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.82□□□□□ -0.04
Cdx4Q07424 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx4Q07424 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx4Q07424 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx4Q07424 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Cdx4Q07424 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cdx4Q07424 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms