Protein–RNA interactions for Protein: P97460

Npas2, Neuronal PAS domain-containing protein 2, mousemouse

Predictions only

Length 816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas2P97460 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npas2P97460 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npas2P97460 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npas2P97460 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npas2P97460 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npas2P97460 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Npas2P97460 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npas2P97460 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npas2P97460 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npas2P97460 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npas2P97460 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npas2P97460 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.74■□□□□ 0.75
Npas2P97460 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npas2P97460 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Npas2P97460 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npas2P97460 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npas2P97460 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npas2P97460 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Npas2P97460 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Npas2P97460 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npas2P97460 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npas2P97460 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Npas2P97460 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npas2P97460 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npas2P97460 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npas2P97460 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npas2P97460 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Npas2P97460 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
Npas2P97460 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Npas2P97460 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Npas2P97460 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.72■□□□□ 0.75
Npas2P97460 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.72■□□□□ 0.75
Npas2P97460 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Npas2P97460 Golph3-205ENSMUST00000228671 2842 ntBASIC19.72■□□□□ 0.75
Npas2P97460 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.72■□□□□ 0.75
Npas2P97460 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Npas2P97460 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Npas2P97460 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Npas2P97460 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npas2P97460 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npas2P97460 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npas2P97460 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npas2P97460 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npas2P97460 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.71■□□□□ 0.75
Npas2P97460 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npas2P97460 Spcs1-204ENSMUST00000226782 949 ntBASIC19.71■□□□□ 0.75
Npas2P97460 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npas2P97460 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Npas2P97460 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npas2P97460 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Npas2P97460 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Npas2P97460 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Npas2P97460 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Npas2P97460 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Npas2P97460 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.7■□□□□ 0.74
Npas2P97460 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.7■□□□□ 0.74
Npas2P97460 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.7■□□□□ 0.74
Npas2P97460 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Npas2P97460 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Npas2P97460 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Npas2P97460 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Npas2P97460 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Npas2P97460 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Npas2P97460 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Npas2P97460 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.7■□□□□ 0.74
Npas2P97460 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Npas2P97460 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npas2P97460 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Npas2P97460 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npas2P97460 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Npas2P97460 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.69■□□□□ 0.74
Npas2P97460 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Npas2P97460 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Npas2P97460 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npas2P97460 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.69■□□□□ 0.74
Npas2P97460 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Npas2P97460 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Npas2P97460 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npas2P97460 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npas2P97460 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Npas2P97460 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npas2P97460 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Npas2P97460 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.68■□□□□ 0.74
Npas2P97460 Gm43137-201ENSMUST00000198052 594 ntBASIC19.68■□□□□ 0.74
Npas2P97460 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npas2P97460 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npas2P97460 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npas2P97460 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Npas2P97460 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Npas2P97460 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npas2P97460 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npas2P97460 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
Npas2P97460 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npas2P97460 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npas2P97460 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Npas2P97460 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Npas2P97460 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.66■□□□□ 0.74
Npas2P97460 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Npas2P97460 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Npas2P97460 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms