Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccl21aP84444 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Ccl21aP84444 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.18■□□□□ 0.18
Ccl21aP84444 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC16.18■□□□□ 0.18
Ccl21aP84444 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccl21aP84444 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccl21aP84444 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ccl21aP84444 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccl21aP84444 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Ccl21aP84444 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccl21aP84444 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccl21aP84444 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccl21aP84444 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccl21aP84444 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ccl21aP84444 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.17■□□□□ 0.18
Ccl21aP84444 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Ccl21aP84444 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.17■□□□□ 0.18
Ccl21aP84444 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.17■□□□□ 0.18
Ccl21aP84444 Gm18666-201ENSMUST00000190039 958 ntBASIC16.17■□□□□ 0.18
Ccl21aP84444 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.17■□□□□ 0.18
Ccl21aP84444 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccl21aP84444 Gm9987-201ENSMUST00000069768 567 ntBASIC16.17■□□□□ 0.18
Ccl21aP84444 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccl21aP84444 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccl21aP84444 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccl21aP84444 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Ccl21aP84444 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccl21aP84444 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Ccl21aP84444 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl21aP84444 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl21aP84444 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl21aP84444 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl21aP84444 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl21aP84444 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl21aP84444 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.16■□□□□ 0.18
Ccl21aP84444 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ccl21aP84444 Gm7860-201ENSMUST00000121190 879 ntBASIC16.16■□□□□ 0.18
Ccl21aP84444 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl21aP84444 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl21aP84444 Gm10698-201ENSMUST00000182663 604 ntBASIC16.16■□□□□ 0.18
Ccl21aP84444 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl21aP84444 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl21aP84444 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Ccl21aP84444 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Ccl21aP84444 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Ccl21aP84444 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl21aP84444 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl21aP84444 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Ccl21aP84444 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Ccl21aP84444 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl21aP84444 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl21aP84444 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl21aP84444 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.15■□□□□ 0.18
Ccl21aP84444 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.15■□□□□ 0.18
Ccl21aP84444 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl21aP84444 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl21aP84444 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl21aP84444 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl21aP84444 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl21aP84444 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl21aP84444 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl21aP84444 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl21aP84444 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
Ccl21aP84444 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl21aP84444 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl21aP84444 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ccl21aP84444 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccl21aP84444 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccl21aP84444 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.14■□□□□ 0.17
Ccl21aP84444 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccl21aP84444 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccl21aP84444 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ccl21aP84444 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.14■□□□□ 0.17
Ccl21aP84444 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ccl21aP84444 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Ccl21aP84444 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ccl21aP84444 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccl21aP84444 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccl21aP84444 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccl21aP84444 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.13■□□□□ 0.17
Ccl21aP84444 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccl21aP84444 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.13■□□□□ 0.17
Ccl21aP84444 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.13■□□□□ 0.17
Ccl21aP84444 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccl21aP84444 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccl21aP84444 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccl21aP84444 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccl21aP84444 AA386476-201ENSMUST00000098781 1665 ntBASIC16.13■□□□□ 0.17
Ccl21aP84444 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccl21aP84444 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccl21aP84444 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccl21aP84444 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ccl21aP84444 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
Ccl21aP84444 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccl21aP84444 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccl21aP84444 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Ccl21aP84444 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccl21aP84444 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccl21aP84444 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Ccl21aP84444 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms