Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Crnkl1P63154 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.01■□□□□ 0.63
Crnkl1P63154 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Crnkl1P63154 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Crnkl1P63154 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Crnkl1P63154 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Crnkl1P63154 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Crnkl1P63154 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Crnkl1P63154 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Crnkl1P63154 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Crnkl1P63154 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Crnkl1P63154 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Crnkl1P63154 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19■□□□□ 0.63
Crnkl1P63154 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19■□□□□ 0.63
Crnkl1P63154 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Crnkl1P63154 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19■□□□□ 0.63
Crnkl1P63154 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Crnkl1P63154 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Crnkl1P63154 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Crnkl1P63154 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19■□□□□ 0.63
Crnkl1P63154 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19■□□□□ 0.63
Crnkl1P63154 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Crnkl1P63154 Gm44832-201ENSMUST00000208849 2303 ntBASIC19■□□□□ 0.63
Crnkl1P63154 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Crnkl1P63154 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Crnkl1P63154 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Crnkl1P63154 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Crnkl1P63154 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Crnkl1P63154 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.99■□□□□ 0.63
Crnkl1P63154 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Crnkl1P63154 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Crnkl1P63154 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Crnkl1P63154 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Crnkl1P63154 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Crnkl1P63154 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Crnkl1P63154 Etf1-202ENSMUST00000180351 108 ntBASIC18.99■□□□□ 0.63
Crnkl1P63154 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Crnkl1P63154 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Crnkl1P63154 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Crnkl1P63154 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Crnkl1P63154 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Crnkl1P63154 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Crnkl1P63154 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Crnkl1P63154 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Crnkl1P63154 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Crnkl1P63154 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Crnkl1P63154 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Crnkl1P63154 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Crnkl1P63154 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Crnkl1P63154 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Crnkl1P63154 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Crnkl1P63154 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.98■□□□□ 0.63
Crnkl1P63154 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Crnkl1P63154 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.98■□□□□ 0.63
Crnkl1P63154 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Crnkl1P63154 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Crnkl1P63154 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Crnkl1P63154 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Crnkl1P63154 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Crnkl1P63154 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Crnkl1P63154 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.97■□□□□ 0.63
Crnkl1P63154 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.97■□□□□ 0.63
Crnkl1P63154 Gm10399-202ENSMUST00000202768 748 ntBASIC18.97■□□□□ 0.63
Crnkl1P63154 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.97■□□□□ 0.63
Crnkl1P63154 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Crnkl1P63154 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Crnkl1P63154 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Crnkl1P63154 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Crnkl1P63154 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Crnkl1P63154 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Crnkl1P63154 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Crnkl1P63154 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Crnkl1P63154 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Crnkl1P63154 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.96■□□□□ 0.63
Crnkl1P63154 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.96■□□□□ 0.63
Crnkl1P63154 Gm9959-201ENSMUST00000068277 390 ntBASIC18.96■□□□□ 0.63
Crnkl1P63154 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Crnkl1P63154 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Crnkl1P63154 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Crnkl1P63154 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Crnkl1P63154 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Crnkl1P63154 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Crnkl1P63154 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Crnkl1P63154 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Crnkl1P63154 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Crnkl1P63154 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Crnkl1P63154 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Crnkl1P63154 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
Crnkl1P63154 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Crnkl1P63154 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Crnkl1P63154 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Crnkl1P63154 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Crnkl1P63154 Gm45102-201ENSMUST00000207427 857 ntBASIC18.95■□□□□ 0.62
Crnkl1P63154 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Crnkl1P63154 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Crnkl1P63154 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Crnkl1P63154 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Crnkl1P63154 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Crnkl1P63154 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Crnkl1P63154 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms