Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm3P62311 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm3P62311 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm3P62311 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lsm3P62311 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm3P62311 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm3P62311 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.62■□□□□ 0.41
Lsm3P62311 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm3P62311 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm3P62311 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Lsm3P62311 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Lsm3P62311 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm3P62311 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm3P62311 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm3P62311 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Lsm3P62311 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm3P62311 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm3P62311 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Lsm3P62311 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm3P62311 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lsm3P62311 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Lsm3P62311 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm3P62311 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Lsm3P62311 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Lsm3P62311 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm3P62311 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm3P62311 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm3P62311 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm3P62311 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm3P62311 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm3P62311 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.61■□□□□ 0.41
Lsm3P62311 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm3P62311 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Lsm3P62311 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.61■□□□□ 0.41
Lsm3P62311 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm3P62311 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm3P62311 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm3P62311 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.6■□□□□ 0.41
Lsm3P62311 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm3P62311 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm3P62311 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm3P62311 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
Lsm3P62311 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm3P62311 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.6■□□□□ 0.41
Lsm3P62311 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm3P62311 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Lsm3P62311 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm3P62311 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm3P62311 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm3P62311 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.6■□□□□ 0.41
Lsm3P62311 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm3P62311 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm3P62311 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Lsm3P62311 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Lsm3P62311 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm3P62311 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Lsm3P62311 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm3P62311 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm3P62311 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm3P62311 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm3P62311 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm3P62311 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm3P62311 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm3P62311 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm3P62311 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm3P62311 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm3P62311 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.59■□□□□ 0.41
Lsm3P62311 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm3P62311 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Lsm3P62311 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Lsm3P62311 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm3P62311 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm3P62311 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.58■□□□□ 0.41
Lsm3P62311 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm3P62311 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm3P62311 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Lsm3P62311 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm3P62311 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm3P62311 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm3P62311 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm3P62311 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm3P62311 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm3P62311 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm3P62311 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm3P62311 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Lsm3P62311 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.58■□□□□ 0.4
Lsm3P62311 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.58■□□□□ 0.4
Lsm3P62311 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Lsm3P62311 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm3P62311 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm3P62311 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm3P62311 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm3P62311 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm3P62311 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm3P62311 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm3P62311 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm3P62311 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Lsm3P62311 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Lsm3P62311 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Lsm3P62311 BC021767-201ENSMUST00000126387 1716 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms