Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a1P61620 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a1P61620 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a1P61620 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a1P61620 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a1P61620 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Sec61a1P61620 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.88■□□□□ 0.29
Sec61a1P61620 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a1P61620 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Sec61a1P61620 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a1P61620 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Sec61a1P61620 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a1P61620 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.88■□□□□ 0.29
Sec61a1P61620 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a1P61620 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a1P61620 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a1P61620 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sec61a1P61620 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Sec61a1P61620 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.87■□□□□ 0.29
Sec61a1P61620 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.87■□□□□ 0.29
Sec61a1P61620 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sec61a1P61620 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sec61a1P61620 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Sec61a1P61620 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Sec61a1P61620 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Sec61a1P61620 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
Sec61a1P61620 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a1P61620 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a1P61620 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a1P61620 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a1P61620 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Sec61a1P61620 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a1P61620 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a1P61620 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a1P61620 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a1P61620 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a1P61620 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a1P61620 Gm45417-201ENSMUST00000209533 758 ntBASIC16.86■□□□□ 0.29
Sec61a1P61620 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a1P61620 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a1P61620 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a1P61620 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a1P61620 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a1P61620 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a1P61620 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sec61a1P61620 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sec61a1P61620 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sec61a1P61620 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sec61a1P61620 Gm12821-201ENSMUST00000120022 600 ntBASIC16.85■□□□□ 0.29
Sec61a1P61620 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sec61a1P61620 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.85■□□□□ 0.29
Sec61a1P61620 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sec61a1P61620 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.85■□□□□ 0.29
Sec61a1P61620 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sec61a1P61620 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sec61a1P61620 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sec61a1P61620 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
Sec61a1P61620 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a1P61620 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a1P61620 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a1P61620 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a1P61620 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a1P61620 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a1P61620 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a1P61620 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a1P61620 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a1P61620 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a1P61620 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a1P61620 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a1P61620 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a1P61620 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sec61a1P61620 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a1P61620 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a1P61620 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sec61a1P61620 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sec61a1P61620 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sec61a1P61620 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sec61a1P61620 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sec61a1P61620 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sec61a1P61620 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sec61a1P61620 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sec61a1P61620 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sec61a1P61620 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sec61a1P61620 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Sec61a1P61620 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sec61a1P61620 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sec61a1P61620 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Sec61a1P61620 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Sec61a1P61620 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Sec61a1P61620 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sec61a1P61620 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sec61a1P61620 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sec61a1P61620 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Sec61a1P61620 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sec61a1P61620 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sec61a1P61620 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sec61a1P61620 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sec61a1P61620 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sec61a1P61620 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.82■□□□□ 0.28
Sec61a1P61620 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms