Protein–RNA interactions for Protein: P57780

Actn4, Alpha-actinin-4, mousemouse

Known RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Actn4P57780 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.73■□□□□ 0.91
Actn4P57780 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Actn4P57780 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Actn4P57780 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Actn4P57780 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.73■□□□□ 0.91
Actn4P57780 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Actn4P57780 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Actn4P57780 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Actn4P57780 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Actn4P57780 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Actn4P57780 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Actn4P57780 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.72■□□□□ 0.91
Actn4P57780 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Actn4P57780 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Actn4P57780 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Actn4P57780 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Actn4P57780 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Actn4P57780 Gm19891-201ENSMUST00000189771 303 ntBASIC20.72■□□□□ 0.91
Actn4P57780 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Actn4P57780 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Actn4P57780 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Actn4P57780 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Actn4P57780 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.72■□□□□ 0.91
Actn4P57780 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.71■□□□□ 0.91
Actn4P57780 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Actn4P57780 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.71■□□□□ 0.91
Actn4P57780 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Actn4P57780 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Actn4P57780 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Actn4P57780 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.71■□□□□ 0.91
Actn4P57780 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Actn4P57780 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Actn4P57780 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Actn4P57780 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Actn4P57780 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Actn4P57780 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Actn4P57780 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.7■□□□□ 0.9
Actn4P57780 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Actn4P57780 Serp2-204ENSMUST00000228055 705 ntBASIC20.7■□□□□ 0.9
Actn4P57780 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Actn4P57780 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Actn4P57780 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Actn4P57780 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.7■□□□□ 0.9
Actn4P57780 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Actn4P57780 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Actn4P57780 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Actn4P57780 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Actn4P57780 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Actn4P57780 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Actn4P57780 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Actn4P57780 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.69■□□□□ 0.9
Actn4P57780 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Actn4P57780 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Actn4P57780 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.69■□□□□ 0.9
Actn4P57780 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Actn4P57780 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Actn4P57780 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Actn4P57780 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.69■□□□□ 0.9
Actn4P57780 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.68■□□□□ 0.9
Actn4P57780 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Actn4P57780 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.68■□□□□ 0.9
Actn4P57780 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Actn4P57780 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
Actn4P57780 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Actn4P57780 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Actn4P57780 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Actn4P57780 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Actn4P57780 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.67■□□□□ 0.9
Actn4P57780 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Actn4P57780 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Actn4P57780 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Actn4P57780 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Actn4P57780 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Actn4P57780 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Actn4P57780 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Actn4P57780 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Actn4P57780 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Actn4P57780 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Actn4P57780 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Actn4P57780 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.66■□□□□ 0.9
Actn4P57780 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.66■□□□□ 0.9
Actn4P57780 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Actn4P57780 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Actn4P57780 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.66■□□□□ 0.9
Actn4P57780 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Actn4P57780 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.66■□□□□ 0.9
Actn4P57780 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Actn4P57780 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Actn4P57780 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Actn4P57780 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Actn4P57780 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Actn4P57780 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Actn4P57780 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Actn4P57780 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Actn4P57780 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Actn4P57780 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.65■□□□□ 0.9
Actn4P57780 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Actn4P57780 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Actn4P57780 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Actn4P57780 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms