Protein–RNA interactions for Protein: P56716

Rp1, Oxygen-regulated protein 1, mousemouse

Predictions only

Length 2,095 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1P56716 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Rp1P56716 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rp1P56716 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rp1P56716 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rp1P56716 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.9■□□□□ 0.78
Rp1P56716 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rp1P56716 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rp1P56716 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rp1P56716 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rp1P56716 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rp1P56716 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rp1P56716 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.89■□□□□ 0.77
Rp1P56716 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rp1P56716 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Rp1P56716 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rp1P56716 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rp1P56716 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Rp1P56716 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rp1P56716 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rp1P56716 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rp1P56716 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.88■□□□□ 0.77
Rp1P56716 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rp1P56716 Gm22240-201ENSMUST00000175225 82 ntBASIC19.88■□□□□ 0.77
Rp1P56716 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Rp1P56716 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rp1P56716 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Rp1P56716 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rp1P56716 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rp1P56716 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rp1P56716 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rp1P56716 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Rp1P56716 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rp1P56716 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.87■□□□□ 0.77
Rp1P56716 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rp1P56716 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rp1P56716 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rp1P56716 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rp1P56716 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rp1P56716 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Rp1P56716 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rp1P56716 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Rp1P56716 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Rp1P56716 Trmt13-210ENSMUST00000198454 880 ntBASIC19.86■□□□□ 0.77
Rp1P56716 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rp1P56716 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rp1P56716 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rp1P56716 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1P56716 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1P56716 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1P56716 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1P56716 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1P56716 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1P56716 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1P56716 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1P56716 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1P56716 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Rp1P56716 Rab3c-203ENSMUST00000224180 967 ntBASIC19.85■□□□□ 0.77
Rp1P56716 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rp1P56716 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rp1P56716 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rp1P56716 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.84■□□□□ 0.77
Rp1P56716 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rp1P56716 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.84■□□□□ 0.77
Rp1P56716 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rp1P56716 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rp1P56716 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rp1P56716 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rp1P56716 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Rp1P56716 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Rp1P56716 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Rp1P56716 Gm8520-201ENSMUST00000186517 868 ntBASIC19.83■□□□□ 0.77
Rp1P56716 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.83■□□□□ 0.77
Rp1P56716 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rp1P56716 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.83■□□□□ 0.77
Rp1P56716 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.83■□□□□ 0.77
Rp1P56716 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Rp1P56716 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.83■□□□□ 0.76
Rp1P56716 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rp1P56716 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rp1P56716 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rp1P56716 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Rp1P56716 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Rp1P56716 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Rp1P56716 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.82■□□□□ 0.76
Rp1P56716 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rp1P56716 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rp1P56716 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rp1P56716 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Rp1P56716 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rp1P56716 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rp1P56716 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Rp1P56716 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Rp1P56716 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rp1P56716 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.82■□□□□ 0.76
Rp1P56716 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rp1P56716 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rp1P56716 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rp1P56716 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.81■□□□□ 0.76
Rp1P56716 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rp1P56716 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms