Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lbx1P52955 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lbx1P52955 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lbx1P52955 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC18.77■□□□□ 0.6
Lbx1P52955 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.77■□□□□ 0.6
Lbx1P52955 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lbx1P52955 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lbx1P52955 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lbx1P52955 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.76■□□□□ 0.59
Lbx1P52955 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lbx1P52955 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.76■□□□□ 0.59
Lbx1P52955 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lbx1P52955 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lbx1P52955 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lbx1P52955 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lbx1P52955 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lbx1P52955 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lbx1P52955 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.76■□□□□ 0.59
Lbx1P52955 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.76■□□□□ 0.59
Lbx1P52955 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lbx1P52955 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.76■□□□□ 0.59
Lbx1P52955 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lbx1P52955 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lbx1P52955 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lbx1P52955 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lbx1P52955 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.75■□□□□ 0.59
Lbx1P52955 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lbx1P52955 Ank2-226ENSMUST00000189368 339 ntBASIC18.75■□□□□ 0.59
Lbx1P52955 Gm33142-201ENSMUST00000193913 867 ntBASIC18.75■□□□□ 0.59
Lbx1P52955 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC18.75■□□□□ 0.59
Lbx1P52955 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Lbx1P52955 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lbx1P52955 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lbx1P52955 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.75■□□□□ 0.59
Lbx1P52955 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lbx1P52955 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lbx1P52955 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lbx1P52955 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lbx1P52955 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lbx1P52955 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lbx1P52955 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lbx1P52955 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lbx1P52955 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.74■□□□□ 0.59
Lbx1P52955 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.74■□□□□ 0.59
Lbx1P52955 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lbx1P52955 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lbx1P52955 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lbx1P52955 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Lbx1P52955 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Lbx1P52955 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Lbx1P52955 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Lbx1P52955 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC18.73■□□□□ 0.59
Lbx1P52955 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lbx1P52955 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lbx1P52955 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
Lbx1P52955 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Lbx1P52955 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lbx1P52955 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Lbx1P52955 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lbx1P52955 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lbx1P52955 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.72■□□□□ 0.59
Lbx1P52955 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.72■□□□□ 0.59
Lbx1P52955 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lbx1P52955 Gm23634-201ENSMUST00000175071 91 ntBASIC18.72■□□□□ 0.59
Lbx1P52955 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.72■□□□□ 0.59
Lbx1P52955 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Lbx1P52955 Gm30025-201ENSMUST00000218555 728 ntBASIC18.72■□□□□ 0.59
Lbx1P52955 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Lbx1P52955 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Lbx1P52955 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Lbx1P52955 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.72■□□□□ 0.59
Lbx1P52955 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lbx1P52955 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lbx1P52955 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
Lbx1P52955 Gm14859-201ENSMUST00000117752 357 ntBASIC18.71■□□□□ 0.59
Lbx1P52955 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Lbx1P52955 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lbx1P52955 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.71■□□□□ 0.59
Lbx1P52955 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Lbx1P52955 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.71■□□□□ 0.59
Lbx1P52955 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Lbx1P52955 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Lbx1P52955 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.71■□□□□ 0.58
Lbx1P52955 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lbx1P52955 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lbx1P52955 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Lbx1P52955 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lbx1P52955 Mir6236-201ENSMUST00000184437 123 ntBASIC18.7■□□□□ 0.58
Lbx1P52955 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Lbx1P52955 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Lbx1P52955 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Lbx1P52955 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lbx1P52955 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lbx1P52955 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
Lbx1P52955 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Lbx1P52955 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC18.69■□□□□ 0.58
Lbx1P52955 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lbx1P52955 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Lbx1P52955 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Lbx1P52955 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms