Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CcnfP51944 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CcnfP51944 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CcnfP51944 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CcnfP51944 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CcnfP51944 Rarb-207ENSMUST00000225921 2756 ntBASIC18.4■□□□□ 0.54
CcnfP51944 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CcnfP51944 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CcnfP51944 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CcnfP51944 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CcnfP51944 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC18.39■□□□□ 0.53
CcnfP51944 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CcnfP51944 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CcnfP51944 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CcnfP51944 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.39■□□□□ 0.53
CcnfP51944 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.39■□□□□ 0.53
CcnfP51944 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CcnfP51944 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CcnfP51944 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CcnfP51944 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CcnfP51944 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CcnfP51944 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.39■□□□□ 0.53
CcnfP51944 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.39■□□□□ 0.53
CcnfP51944 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CcnfP51944 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CcnfP51944 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CcnfP51944 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CcnfP51944 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CcnfP51944 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CcnfP51944 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CcnfP51944 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CcnfP51944 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.38■□□□□ 0.53
CcnfP51944 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.38■□□□□ 0.53
CcnfP51944 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.38■□□□□ 0.53
CcnfP51944 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CcnfP51944 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.38■□□□□ 0.53
CcnfP51944 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CcnfP51944 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CcnfP51944 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CcnfP51944 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.37■□□□□ 0.53
CcnfP51944 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CcnfP51944 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CcnfP51944 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CcnfP51944 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CcnfP51944 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CcnfP51944 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CcnfP51944 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.37■□□□□ 0.53
CcnfP51944 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CcnfP51944 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CcnfP51944 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CcnfP51944 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CcnfP51944 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CcnfP51944 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CcnfP51944 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CcnfP51944 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CcnfP51944 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.36■□□□□ 0.53
CcnfP51944 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CcnfP51944 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.36■□□□□ 0.53
CcnfP51944 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.36■□□□□ 0.53
CcnfP51944 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CcnfP51944 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CcnfP51944 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CcnfP51944 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CcnfP51944 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.36■□□□□ 0.53
CcnfP51944 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CcnfP51944 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CcnfP51944 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CcnfP51944 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CcnfP51944 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CcnfP51944 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CcnfP51944 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CcnfP51944 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CcnfP51944 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CcnfP51944 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CcnfP51944 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CcnfP51944 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CcnfP51944 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CcnfP51944 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.34■□□□□ 0.53
CcnfP51944 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CcnfP51944 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CcnfP51944 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CcnfP51944 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CcnfP51944 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CcnfP51944 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.34■□□□□ 0.53
CcnfP51944 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CcnfP51944 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CcnfP51944 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CcnfP51944 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CcnfP51944 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CcnfP51944 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CcnfP51944 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CcnfP51944 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.33■□□□□ 0.53
CcnfP51944 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.33■□□□□ 0.53
CcnfP51944 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CcnfP51944 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CcnfP51944 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CcnfP51944 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CcnfP51944 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CcnfP51944 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.33■□□□□ 0.52
CcnfP51944 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms