Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sdc2P43407 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Sdc2P43407 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sdc2P43407 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sdc2P43407 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sdc2P43407 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Sdc2P43407 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sdc2P43407 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Sdc2P43407 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Sdc2P43407 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Sdc2P43407 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sdc2P43407 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sdc2P43407 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sdc2P43407 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Sdc2P43407 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sdc2P43407 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sdc2P43407 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sdc2P43407 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sdc2P43407 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sdc2P43407 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sdc2P43407 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Sdc2P43407 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC21.56■■□□□ 1.04
Sdc2P43407 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sdc2P43407 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sdc2P43407 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sdc2P43407 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.56■■□□□ 1.04
Sdc2P43407 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sdc2P43407 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.56■■□□□ 1.04
Sdc2P43407 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sdc2P43407 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.56■■□□□ 1.04
Sdc2P43407 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sdc2P43407 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sdc2P43407 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sdc2P43407 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.55■■□□□ 1.04
Sdc2P43407 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sdc2P43407 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sdc2P43407 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sdc2P43407 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Sdc2P43407 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sdc2P43407 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.55■■□□□ 1.04
Sdc2P43407 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sdc2P43407 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sdc2P43407 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sdc2P43407 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.55■■□□□ 1.04
Sdc2P43407 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sdc2P43407 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sdc2P43407 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sdc2P43407 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.54■■□□□ 1.04
Sdc2P43407 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Sdc2P43407 Serp2-204ENSMUST00000228055 705 ntBASIC21.54■■□□□ 1.04
Sdc2P43407 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sdc2P43407 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sdc2P43407 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Sdc2P43407 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sdc2P43407 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sdc2P43407 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Sdc2P43407 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sdc2P43407 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.53■■□□□ 1.04
Sdc2P43407 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Sdc2P43407 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Sdc2P43407 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sdc2P43407 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sdc2P43407 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.53■■□□□ 1.04
Sdc2P43407 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sdc2P43407 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sdc2P43407 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sdc2P43407 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Sdc2P43407 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Sdc2P43407 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.52■■□□□ 1.04
Sdc2P43407 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sdc2P43407 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sdc2P43407 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Sdc2P43407 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sdc2P43407 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.52■■□□□ 1.04
Sdc2P43407 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Sdc2P43407 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Sdc2P43407 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Sdc2P43407 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Sdc2P43407 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
Sdc2P43407 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Sdc2P43407 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sdc2P43407 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sdc2P43407 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sdc2P43407 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sdc2P43407 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sdc2P43407 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.51■■□□□ 1.03
Sdc2P43407 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sdc2P43407 Gm9847-201ENSMUST00000052528 599 ntBASIC21.51■■□□□ 1.03
Sdc2P43407 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sdc2P43407 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.51■■□□□ 1.03
Sdc2P43407 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Sdc2P43407 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.51■■□□□ 1.03
Sdc2P43407 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sdc2P43407 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sdc2P43407 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sdc2P43407 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sdc2P43407 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sdc2P43407 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sdc2P43407 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
Sdc2P43407 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms