Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Mmp13P33435 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Mmp13P33435 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp13P33435 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Mmp13P33435 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp13P33435 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.68■□□□□ 0.74
Mmp13P33435 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
Mmp13P33435 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp13P33435 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Mmp13P33435 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Mmp13P33435 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp13P33435 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp13P33435 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Mmp13P33435 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Mmp13P33435 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp13P33435 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp13P33435 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Mmp13P33435 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Mmp13P33435 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp13P33435 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp13P33435 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp13P33435 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp13P33435 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp13P33435 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp13P33435 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.67■□□□□ 0.74
Mmp13P33435 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp13P33435 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp13P33435 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Mmp13P33435 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Mmp13P33435 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Mmp13P33435 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp13P33435 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Mmp13P33435 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp13P33435 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Mmp13P33435 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp13P33435 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp13P33435 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Mmp13P33435 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp13P33435 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Mmp13P33435 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.66■□□□□ 0.74
Mmp13P33435 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp13P33435 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp13P33435 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp13P33435 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp13P33435 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Mmp13P33435 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp13P33435 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp13P33435 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Mmp13P33435 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Mmp13P33435 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.64■□□□□ 0.73
Mmp13P33435 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.64■□□□□ 0.73
Mmp13P33435 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.64■□□□□ 0.73
Mmp13P33435 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp13P33435 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp13P33435 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp13P33435 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.64■□□□□ 0.73
Mmp13P33435 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp13P33435 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp13P33435 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp13P33435 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.64■□□□□ 0.73
Mmp13P33435 AA386476-201ENSMUST00000098781 1665 ntBASIC19.64■□□□□ 0.73
Mmp13P33435 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Mmp13P33435 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Mmp13P33435 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Mmp13P33435 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.63■□□□□ 0.73
Mmp13P33435 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp13P33435 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp13P33435 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp13P33435 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.63■□□□□ 0.73
Mmp13P33435 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Mmp13P33435 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp13P33435 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp13P33435 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp13P33435 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp13P33435 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Mmp13P33435 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Mmp13P33435 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Mmp13P33435 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Mmp13P33435 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp13P33435 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp13P33435 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp13P33435 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp13P33435 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp13P33435 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Mmp13P33435 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.62■□□□□ 0.73
Mmp13P33435 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp13P33435 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
Mmp13P33435 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp13P33435 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp13P33435 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp13P33435 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp13P33435 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp13P33435 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.61■□□□□ 0.73
Mmp13P33435 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp13P33435 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.61■□□□□ 0.73
Mmp13P33435 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Mmp13P33435 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp13P33435 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Mmp13P33435 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC19.61■□□□□ 0.73
Mmp13P33435 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms