Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a11P31650 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a11P31650 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a11P31650 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a11P31650 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a11P31650 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a11P31650 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc6a11P31650 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a11P31650 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
Slc6a11P31650 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a11P31650 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a11P31650 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a11P31650 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a11P31650 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a11P31650 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a11P31650 Gm29257-201ENSMUST00000186115 639 ntBASIC18.25■□□□□ 0.51
Slc6a11P31650 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.25■□□□□ 0.51
Slc6a11P31650 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a11P31650 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.25■□□□□ 0.51
Slc6a11P31650 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a11P31650 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc6a11P31650 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Slc6a11P31650 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a11P31650 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a11P31650 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a11P31650 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Slc6a11P31650 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a11P31650 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Slc6a11P31650 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.24■□□□□ 0.51
Slc6a11P31650 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
Slc6a11P31650 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a11P31650 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a11P31650 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a11P31650 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc6a11P31650 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
Slc6a11P31650 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Slc6a11P31650 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a11P31650 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a11P31650 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a11P31650 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a11P31650 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.23■□□□□ 0.51
Slc6a11P31650 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.23■□□□□ 0.51
Slc6a11P31650 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.23■□□□□ 0.51
Slc6a11P31650 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc6a11P31650 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.22■□□□□ 0.51
Slc6a11P31650 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
Slc6a11P31650 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a11P31650 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a11P31650 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a11P31650 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Slc6a11P31650 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Slc6a11P31650 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a11P31650 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.22■□□□□ 0.51
Slc6a11P31650 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.22■□□□□ 0.51
Slc6a11P31650 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
Slc6a11P31650 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a11P31650 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a11P31650 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a11P31650 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc6a11P31650 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.22■□□□□ 0.51
Slc6a11P31650 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a11P31650 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a11P31650 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a11P31650 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a11P31650 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a11P31650 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a11P31650 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a11P31650 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.21■□□□□ 0.51
Slc6a11P31650 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a11P31650 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a11P31650 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Slc6a11P31650 Gm43137-201ENSMUST00000198052 594 ntBASIC18.21■□□□□ 0.51
Slc6a11P31650 Gm43017-201ENSMUST00000198296 752 ntBASIC18.21■□□□□ 0.51
Slc6a11P31650 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a11P31650 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a11P31650 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a11P31650 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Slc6a11P31650 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a11P31650 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Slc6a11P31650 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a11P31650 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Slc6a11P31650 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc6a11P31650 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Slc6a11P31650 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.2■□□□□ 0.5
Slc6a11P31650 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a11P31650 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Slc6a11P31650 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.2■□□□□ 0.5
Slc6a11P31650 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a11P31650 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Slc6a11P31650 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc6a11P31650 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Slc6a11P31650 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a11P31650 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a11P31650 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.19■□□□□ 0.5
Slc6a11P31650 Mir7075-201ENSMUST00000184187 82 ntBASIC18.19■□□□□ 0.5
Slc6a11P31650 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a11P31650 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Slc6a11P31650 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a11P31650 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Slc6a11P31650 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms