Protein–RNA interactions for Protein: P31240

Pdgfb, Platelet-derived growth factor subunit B, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfbP31240 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
PdgfbP31240 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PdgfbP31240 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
PdgfbP31240 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PdgfbP31240 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PdgfbP31240 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PdgfbP31240 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PdgfbP31240 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.49■□□□□ 0.71
PdgfbP31240 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PdgfbP31240 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PdgfbP31240 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PdgfbP31240 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
PdgfbP31240 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PdgfbP31240 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PdgfbP31240 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PdgfbP31240 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PdgfbP31240 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.47■□□□□ 0.71
PdgfbP31240 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfbP31240 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfbP31240 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.47■□□□□ 0.71
PdgfbP31240 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfbP31240 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfbP31240 Gm2559-201ENSMUST00000201323 363 ntBASIC19.47■□□□□ 0.71
PdgfbP31240 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfbP31240 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.47■□□□□ 0.71
PdgfbP31240 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PdgfbP31240 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PdgfbP31240 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PdgfbP31240 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
PdgfbP31240 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PdgfbP31240 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PdgfbP31240 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfbP31240 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfbP31240 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfbP31240 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfbP31240 Dio3-201ENSMUST00000097228 1449 ntBASIC19.45■□□□□ 0.7
PdgfbP31240 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfbP31240 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfbP31240 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.45■□□□□ 0.7
PdgfbP31240 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfbP31240 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfbP31240 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfbP31240 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfbP31240 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfbP31240 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PdgfbP31240 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
PdgfbP31240 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PdgfbP31240 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PdgfbP31240 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.44■□□□□ 0.7
PdgfbP31240 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC19.44■□□□□ 0.7
PdgfbP31240 Gm10698-201ENSMUST00000182663 604 ntBASIC19.44■□□□□ 0.7
PdgfbP31240 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.44■□□□□ 0.7
PdgfbP31240 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.44■□□□□ 0.7
PdgfbP31240 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.44■□□□□ 0.7
PdgfbP31240 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.44■□□□□ 0.7
PdgfbP31240 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.44■□□□□ 0.7
PdgfbP31240 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PdgfbP31240 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PdgfbP31240 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PdgfbP31240 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PdgfbP31240 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PdgfbP31240 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PdgfbP31240 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PdgfbP31240 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PdgfbP31240 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PdgfbP31240 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PdgfbP31240 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.43■□□□□ 0.7
PdgfbP31240 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PdgfbP31240 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.43■□□□□ 0.7
PdgfbP31240 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PdgfbP31240 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PdgfbP31240 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.42■□□□□ 0.7
PdgfbP31240 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PdgfbP31240 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC19.42■□□□□ 0.7
PdgfbP31240 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PdgfbP31240 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PdgfbP31240 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PdgfbP31240 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PdgfbP31240 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PdgfbP31240 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PdgfbP31240 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.41■□□□□ 0.7
PdgfbP31240 Gm37055-201ENSMUST00000191866 133 ntBASIC19.41■□□□□ 0.7
PdgfbP31240 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC19.41■□□□□ 0.7
PdgfbP31240 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PdgfbP31240 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PdgfbP31240 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PdgfbP31240 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PdgfbP31240 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PdgfbP31240 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PdgfbP31240 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PdgfbP31240 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PdgfbP31240 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.4■□□□□ 0.7
PdgfbP31240 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PdgfbP31240 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PdgfbP31240 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PdgfbP31240 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PdgfbP31240 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.4■□□□□ 0.7
PdgfbP31240 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PdgfbP31240 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PdgfbP31240 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms