Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp3P28862 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.75■□□□□ 0.91
Mmp3P28862 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp3P28862 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Mmp3P28862 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.75■□□□□ 0.91
Mmp3P28862 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp3P28862 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp3P28862 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp3P28862 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp3P28862 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.74■□□□□ 0.91
Mmp3P28862 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Mmp3P28862 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp3P28862 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.74■□□□□ 0.91
Mmp3P28862 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.74■□□□□ 0.91
Mmp3P28862 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
Mmp3P28862 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Mmp3P28862 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.74■□□□□ 0.91
Mmp3P28862 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.74■□□□□ 0.91
Mmp3P28862 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp3P28862 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Mmp3P28862 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp3P28862 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp3P28862 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Mmp3P28862 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp3P28862 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Mmp3P28862 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp3P28862 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp3P28862 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp3P28862 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp3P28862 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.73■□□□□ 0.91
Mmp3P28862 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp3P28862 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Mmp3P28862 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp3P28862 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Mmp3P28862 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.72■□□□□ 0.91
Mmp3P28862 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp3P28862 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp3P28862 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp3P28862 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp3P28862 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.72■□□□□ 0.91
Mmp3P28862 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Mmp3P28862 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Mmp3P28862 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp3P28862 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.72■□□□□ 0.91
Mmp3P28862 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Mmp3P28862 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp3P28862 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Mmp3P28862 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Mmp3P28862 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.71■□□□□ 0.91
Mmp3P28862 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.71■□□□□ 0.91
Mmp3P28862 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp3P28862 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Mmp3P28862 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp3P28862 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp3P28862 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp3P28862 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Mmp3P28862 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp3P28862 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Mmp3P28862 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.91
Mmp3P28862 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp3P28862 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp3P28862 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp3P28862 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.7■□□□□ 0.9
Mmp3P28862 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.7■□□□□ 0.9
Mmp3P28862 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp3P28862 Gm6365-201ENSMUST00000054711 744 ntBASIC20.7■□□□□ 0.9
Mmp3P28862 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Mmp3P28862 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
Mmp3P28862 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp3P28862 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp3P28862 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp3P28862 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Mmp3P28862 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp3P28862 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp3P28862 Gm13148-201ENSMUST00000118892 745 ntBASIC20.69■□□□□ 0.9
Mmp3P28862 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp3P28862 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp3P28862 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp3P28862 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Mmp3P28862 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp3P28862 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Mmp3P28862 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp3P28862 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp3P28862 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp3P28862 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.68■□□□□ 0.9
Mmp3P28862 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Mmp3P28862 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Mmp3P28862 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Mmp3P28862 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Mmp3P28862 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp3P28862 Gm7290-201ENSMUST00000104990 617 ntBASIC20.67■□□□□ 0.9
Mmp3P28862 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.67■□□□□ 0.9
Mmp3P28862 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
Mmp3P28862 Gm12918-201ENSMUST00000120234 636 ntBASIC20.67■□□□□ 0.9
Mmp3P28862 Gm15710-201ENSMUST00000121821 636 ntBASIC20.67■□□□□ 0.9
Mmp3P28862 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Mmp3P28862 Gm5075-201ENSMUST00000196916 622 ntBASIC20.67■□□□□ 0.9
Mmp3P28862 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Mmp3P28862 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.67■□□□□ 0.9
Mmp3P28862 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms