Protein–RNA interactions for Protein: P28028

Braf, Serine/threonine-protein kinase B-raf, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BrafP28028 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
BrafP28028 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BrafP28028 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BrafP28028 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BrafP28028 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
BrafP28028 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BrafP28028 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BrafP28028 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
BrafP28028 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
BrafP28028 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
BrafP28028 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.74■□□□□ 0.59
BrafP28028 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BrafP28028 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BrafP28028 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BrafP28028 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
BrafP28028 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.74■□□□□ 0.59
BrafP28028 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BrafP28028 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.74■□□□□ 0.59
BrafP28028 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.74■□□□□ 0.59
BrafP28028 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
BrafP28028 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
BrafP28028 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
BrafP28028 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
BrafP28028 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.74■□□□□ 0.59
BrafP28028 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.74■□□□□ 0.59
BrafP28028 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BrafP28028 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
BrafP28028 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BrafP28028 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BrafP28028 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BrafP28028 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
BrafP28028 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BrafP28028 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.73■□□□□ 0.59
BrafP28028 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BrafP28028 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BrafP28028 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BrafP28028 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
BrafP28028 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
BrafP28028 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BrafP28028 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BrafP28028 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BrafP28028 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BrafP28028 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BrafP28028 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
BrafP28028 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.72■□□□□ 0.59
BrafP28028 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
BrafP28028 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.72■□□□□ 0.59
BrafP28028 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
BrafP28028 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
BrafP28028 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
BrafP28028 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BrafP28028 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
BrafP28028 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.71■□□□□ 0.59
BrafP28028 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BrafP28028 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BrafP28028 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.71■□□□□ 0.59
BrafP28028 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.71■□□□□ 0.59
BrafP28028 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BrafP28028 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
BrafP28028 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.71■□□□□ 0.59
BrafP28028 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BrafP28028 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.7■□□□□ 0.58
BrafP28028 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BrafP28028 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
BrafP28028 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BrafP28028 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BrafP28028 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.7■□□□□ 0.58
BrafP28028 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BrafP28028 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC18.7■□□□□ 0.58
BrafP28028 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.7■□□□□ 0.58
BrafP28028 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.7■□□□□ 0.58
BrafP28028 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
BrafP28028 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BrafP28028 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.7■□□□□ 0.58
BrafP28028 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BrafP28028 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BrafP28028 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
BrafP28028 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.69■□□□□ 0.58
BrafP28028 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BrafP28028 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BrafP28028 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
BrafP28028 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
BrafP28028 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BrafP28028 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BrafP28028 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BrafP28028 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
BrafP28028 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.68■□□□□ 0.58
BrafP28028 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BrafP28028 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BrafP28028 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
BrafP28028 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BrafP28028 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.68■□□□□ 0.58
BrafP28028 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
BrafP28028 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BrafP28028 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BrafP28028 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BrafP28028 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
BrafP28028 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BrafP28028 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
BrafP28028 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms