Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Hoxc6P10629 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hoxc6P10629 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hoxc6P10629 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.55■■□□□ 1.04
Hoxc6P10629 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hoxc6P10629 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Hoxc6P10629 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC21.55■■□□□ 1.04
Hoxc6P10629 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hoxc6P10629 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hoxc6P10629 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.55■■□□□ 1.04
Hoxc6P10629 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Hoxc6P10629 Gm10812-201ENSMUST00000099864 546 ntBASIC21.55■■□□□ 1.04
Hoxc6P10629 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hoxc6P10629 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hoxc6P10629 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Hoxc6P10629 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Hoxc6P10629 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hoxc6P10629 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hoxc6P10629 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hoxc6P10629 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hoxc6P10629 Rab3c-203ENSMUST00000224180 967 ntBASIC21.54■■□□□ 1.04
Hoxc6P10629 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hoxc6P10629 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Hoxc6P10629 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Hoxc6P10629 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.54■■□□□ 1.04
Hoxc6P10629 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Hoxc6P10629 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.53■■□□□ 1.04
Hoxc6P10629 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxc6P10629 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.53■■□□□ 1.04
Hoxc6P10629 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxc6P10629 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.53■■□□□ 1.04
Hoxc6P10629 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxc6P10629 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Hoxc6P10629 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hoxc6P10629 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC21.52■■□□□ 1.04
Hoxc6P10629 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hoxc6P10629 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hoxc6P10629 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hoxc6P10629 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hoxc6P10629 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hoxc6P10629 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hoxc6P10629 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Hoxc6P10629 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Hoxc6P10629 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxc6P10629 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Hoxc6P10629 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxc6P10629 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxc6P10629 Gm7860-201ENSMUST00000121190 879 ntBASIC21.51■■□□□ 1.03
Hoxc6P10629 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxc6P10629 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxc6P10629 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Hoxc6P10629 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxc6P10629 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Hoxc6P10629 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxc6P10629 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxc6P10629 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxc6P10629 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Hoxc6P10629 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxc6P10629 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxc6P10629 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.5■■□□□ 1.03
Hoxc6P10629 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Hoxc6P10629 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
Hoxc6P10629 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxc6P10629 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxc6P10629 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxc6P10629 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxc6P10629 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Hoxc6P10629 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.5■■□□□ 1.03
Hoxc6P10629 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hoxc6P10629 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Hoxc6P10629 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hoxc6P10629 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.49■■□□□ 1.03
Hoxc6P10629 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Hoxc6P10629 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.49■■□□□ 1.03
Hoxc6P10629 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Hoxc6P10629 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Hoxc6P10629 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Hoxc6P10629 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Hoxc6P10629 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hoxc6P10629 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hoxc6P10629 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hoxc6P10629 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hoxc6P10629 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.48■■□□□ 1.03
Hoxc6P10629 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Hoxc6P10629 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hoxc6P10629 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.48■■□□□ 1.03
Hoxc6P10629 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hoxc6P10629 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.47■■□□□ 1.03
Hoxc6P10629 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Hoxc6P10629 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC21.47■■□□□ 1.03
Hoxc6P10629 Gm27032-201ENSMUST00000183124 1116 ntBASIC21.47■■□□□ 1.03
Hoxc6P10629 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hoxc6P10629 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Hoxc6P10629 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hoxc6P10629 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hoxc6P10629 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Hoxc6P10629 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Hoxc6P10629 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hoxc6P10629 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.46■■□□□ 1.03
Hoxc6P10629 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms